Gene PSPA7_5564 details

Gene Information

• Locus tag: PSPA7_5564
• ID: 5357571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5730346
• End bp: 5732319
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640814609
• Product: putative chemotaxis transducer
• Protein accession: YP_001350885
• Protein GI: 152986783
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCTCA AGCAACTCAC CAACCTCAAC ACTCTGCTCC TGCTCACCGT CTGCCTCGCC 
CTGGGAATCA CCCTGTGGTG GTCGCAGCGC GCCATGGAGC GTCCGTTCCA GCTGCTCGAT 
CGCTACCTGG AGCTGTCGCA GCGCTTCGAC GAACAGGTCG CGCGCAACAT CCGCCAATAC 
CTCGGCAGCG GCGACGCCGT GCGCCAGCAG GCGGCGCTGC AAGCTCTGGA TCACCTCGAA 
GAGGCCCTGC CGCAGCTGCC TCCGGAACTG GCGCGGACCC TCGCGCCGAG CCTCGCGGAC 
CTGCGCGGGT TCAGCGCCGG CGAGCTGCTC GCCGCCGGCA AGCTCGCCGG CGACCCGCAG 
GGCCTGTTGC TGCAGGCCGA GCGCGACCTG GCCGGCAACC TGGAGCAATG GTCCGCTTAC 
CTGGAGGCCG CGGCGGATCA ACCCCGGGCC GGCGCCTATC GCCCGCCGCT GCTGCTCGCC 
AGCCTGCACC TGACCCGCCT CAGCCTGGCC CGCGCCAAGC TGGTGGAAAG CGCCAACCCG 
GCGCTGGCCG GCGACGTCGA GCGCGAGCTG GCCAGCCTGC GCGGGCAGGC CGGGCGGATC 
GACGCCCTGC CGCTGCTCGG CGTGCTCGAC GAGCAGCGCT CGGCCAGCGA CGACTTCGCC 
GCCATGATGG GGCTGGCCGG CGACACCGAG GCCGGCGCCG GCAATGCCGA AGACCGCGGC 
GTGACCCTGC GACGCGAACT CGCCAGCCTG CTGCAGCGCT ATCCGGACGA GCTGCGCCGC 
ACCCGCGACC TGATCGAACG GCGCCAGCAA CTGTCCGCCG ACACCGGTTC CAGGCTCGAT 
GCGGTGCGCC AGGCCCTGGC CACCCTGGAA CCGCAGGTGC GCGGCGAGCG CCAGCGCCTG 
CAAGGCCAGG TGCGCCTGAT CCAGGGTGGG ATGATCGTGC TGATCCTGCT CATCGCCCTC 
GCCATCGACA GCCTGCAACG GCGCCTGGCA CGGGTGCTCG GGCAACTGGT GCCGGCGCTC 
TCGGCCTGGG CCGACGGCGA CTTCTCGCGG CCCATCGCCC TGCGTACCCG CACCGAAGAC 
CTGCGCAACC TGGAAGACTC GCTGAACCGC CTGCGCAGCT TCCTTGCCGA GCTGGTCGGC 
GCGATCCACC GCCGCGCCGA ACAGGTCGCC GGCAGCAGCC AGACCCTGGC CGAGGTCAGC 
AGCGGCCTGC ACGCCGGAGT CGAGCGCCAG GCCGGCGATA CCGGGCAGAT CCGCGACGCC 
CTCGGCGACA TGGAGGCGGC GATCCAGCAG GTTGCCGGCG ATGCCAGCCA GACCGCCGAC 
GCCAGCCGCA GCGCCGGCCA GGCGGTGGAA CACGGCCAGC GGGTGATCGG CCAGAGCCTG 
GGCGGCCTGC GCGAGCTGGT CGACGAGGTG CAGGGCAACG CCCAGTCGAT CGAACGCCTG 
GCCGAGGAGT CGGCGACCAT CGGCAGCGTG CTGACGGTGA TCCGCTCGAT CGCCGAACAG 
ACCAACCTGC TCGCCCTCAA TGCCGCCATC GAGGCCGCCC GCGCCGGCGA CCAGGGCCGC 
GGCTTCGCCG TGGTCGCCGA GGAAGTCCGC TCGCTGGCCC AGCGCACCGC CGGCGCCACC 
GAGGAGATCC AGCAGCTCAT CGGCCGCCTG CAGCAGGCCG CGCGGCAGTC GGTGGAGGCC 
ATGCGCAGCC AGGTCGAGCA CGCCGAACGC ACCGCCGAAC AGGCTGGCGC GGCGGAGGGC 
GCGCTGGACG AAGTGGTCGC CGCGATCCAC ACCATCGGCG TGATGGCCGA ACGCATCGCC 
GAAGGCTCGA CCCAGCAGAG CCAGGCGGTC GGCGAGATTC GCTCGCACAG CGAACGCATC 
CACGCCCTGG GCGGGGAAAA CCTGCGCCTG ATCGGCCACA GCCGCGAACA GGGCGAGCAA 
CTGCGGCAAC TGGGCGGCGA CCTGCGCACC ACGGTGCAGG CCTTCCGCCT GTGA 

 

Protein sequence

MRLKQLTNLN TLLLLTVCLA LGITLWWSQR AMERPFQLLD RYLELSQRFD EQVARNIRQY 
LGSGDAVRQQ AALQALDHLE EALPQLPPEL ARTLAPSLAD LRGFSAGELL AAGKLAGDPQ 
GLLLQAERDL AGNLEQWSAY LEAAADQPRA GAYRPPLLLA SLHLTRLSLA RAKLVESANP 
ALAGDVEREL ASLRGQAGRI DALPLLGVLD EQRSASDDFA AMMGLAGDTE AGAGNAEDRG 
VTLRRELASL LQRYPDELRR TRDLIERRQQ LSADTGSRLD AVRQALATLE PQVRGERQRL 
QGQVRLIQGG MIVLILLIAL AIDSLQRRLA RVLGQLVPAL SAWADGDFSR PIALRTRTED 
LRNLEDSLNR LRSFLAELVG AIHRRAEQVA GSSQTLAEVS SGLHAGVERQ AGDTGQIRDA 
LGDMEAAIQQ VAGDASQTAD ASRSAGQAVE HGQRVIGQSL GGLRELVDEV QGNAQSIERL 
AEESATIGSV LTVIRSIAEQ TNLLALNAAI EAARAGDQGR GFAVVAEEVR SLAQRTAGAT 
EEIQQLIGRL QQAARQSVEA MRSQVEHAER TAEQAGAAEG ALDEVVAAIH TIGVMAERIA 
EGSTQQSQAV GEIRSHSERI HALGGENLRL IGHSREQGEQ LRQLGGDLRT TVQAFRL