| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3639 |
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| Symbol | |
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| ID | 4922173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4339825 |
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| End bp | 4341783 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165261 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001095764 |
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| Protein GI | 127514567 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CCACCCTCTC CCTCTGGGCC TCTGCCACCC TGTTATTGCT GGCCGCACTC
TTGGCCGGTG TCGTCGTATG GAGTAACCAG GAACGCGCCC AGATAGAACA GAAGAATCAG
ATGCTGGCCG ACCTGCAGCA GCAGTTTCTG GTCGAGGTTC GCCGCCAGCT GGAGAGCTAC
CTGAGTACGG GCAACAGCCA GCAGCTGAGC AGCGCCAAGC AACAGCTTCA GACCATAGCC
GCCAGCCTGG ACCAGCTTTC TCATGAGGAA GCCAACCGAC TACAGGGGTC TATCTCAAAC
TTTATCAAAG ACTTGGACAG CCAATACCGC GCCGCGGGTA AGCTGGCCGG CAATCCCCGT
CAGCTGCTGG CCCACGCCGA GAGCGAGATG ATCTCCTATA ACCAGCACCT GGCCGAGTAT
GCCGACAAGG GCCTGGCGGA AAACCCAAAA CTCGCCAAGC AATACCTGCA GCTGACTCAG
AGCCTGCCGC CTCTGGTGTA TCAGCTGTCA CAGTTAACCC AGGACTATCT GATTGGCAAA
GATCAGCGCC TCAAGTCACT GCTGGCGACT CAGATCCAAG CCCTGACCGA CTGGCACGAC
CAACTGGCCA AGCTGCCGCT ACTCGGCCTG TATGAAGCCC AGGAGGCGGA CGAGTTTGCC
CTGGGCGACG ACGAGCCGGA ACAGATAGAG ATAGGCGAAA GCTATTACAG CGAGCTGCTC
TCCCTCAGCC AGCGCTATGG CAAAGAGGTG AGCAACACCC ACCAGATGCT GACCGCCAAC
CAGGCTGCCC AGGAAGCCAT GATGGCCGCC ATCGTCCGCA TAGAAGATGA GCTGCTCCAG
CTCGGCCAGG CACAGCAGGC GCAAAACCTG CACCTCAAGC AGCAGCTACA GACCCTGCTC
TATGGTGTGG TCTCTGTGCT GGCAGTATTT GCCCTGGTCT ACCTCTTGTT GCAACAACGC
CGGGTGGTTA AGCCCCTCAG ACACCTGAAT CAGGCCTTCA TGCGCCTGAG CGAGTCCAAC
AACCGCGAGC GCCTGACCAT AGAGCGACGC TGTGAAACCG GCCAGATCGC CGGTCACTTC
AATCAGCTAC TCGATCACTT CGAGGCAGAA GATGCCGCCC AACGCGTCAA GATAGGCCAG
ATCTCCACCT CGCTGTCGCA GCTGGTACAC CGCATTACCG AGCTGACCCA GGGCACAGAG
ACCACGCTCG GCATAGTCGA CACGGCGCAG AATCAGACCG AGCAGGTACG CGCCATCGCC
CGAGAGGTGA GCGAGCTCTC CAGCCAGGTC GAGCAGCATG CCCAGCAGAC CCATAGCCAG
ATGCTCGCCA GTCAGGAAGA GGTGCAGGCC TTTATGAGCG CCGCCGACGA GACTCAGCAG
GCGGTGAGCC ACTGTCACCT CTCTTTAGGC AGCCTGACCA CCTCGGTCAA CGACGTCTCC
ACCATACTGG ACGTGATTGG CAACATCGCC GAGCAGACCA ACCTGCTGGC CCTCAACGCC
GCCATCGAGG CCGCCCGCGC CGGCGAGCAG GGACGCGGTT TCGCCGTGGT CGCCGACGAG
GTGCGTAACC TGTCTCAACG CACCCAGGAA TCCTTGCAGC AGGTGGTGAC CATATTGAGT
CAGCTCACCG AAGCCAATCA GCAACTGACC CTGAGCGTAG AGGGGATAGC GAGCACCAGC
CAGAAGCAGG CCCAGGGGGC GCAGAATCTC TGGCAGGTAA CCCAGACGGT ACAGCAACAG
TCTCAGGAGA TGACAGAGAC CGCCAAGCAG GGCAGTCGCT TCAGCGTCGA TCAGGCCAGC
CACCTGGACA GCCTGTCACA GGCGATGGAG TCGCTGAAAC AGCACGCCAT GGCCGCCGCC
AGCCAGAGCG AGGTGATCGC CGATGAGGTG GCTCAAGGGG TCGCCGACAT AGAGGCCAGC
CTGGGCATCG ACGGACAATC TCTGGATAAC GCCGCCTAA
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| Protein sequence | MKISTLSLWA SATLLLLAAL LAGVVVWSNQ ERAQIEQKNQ MLADLQQQFL VEVRRQLESY
LSTGNSQQLS SAKQQLQTIA ASLDQLSHEE ANRLQGSISN FIKDLDSQYR AAGKLAGNPR
QLLAHAESEM ISYNQHLAEY ADKGLAENPK LAKQYLQLTQ SLPPLVYQLS QLTQDYLIGK
DQRLKSLLAT QIQALTDWHD QLAKLPLLGL YEAQEADEFA LGDDEPEQIE IGESYYSELL
SLSQRYGKEV SNTHQMLTAN QAAQEAMMAA IVRIEDELLQ LGQAQQAQNL HLKQQLQTLL
YGVVSVLAVF ALVYLLLQQR RVVKPLRHLN QAFMRLSESN NRERLTIERR CETGQIAGHF
NQLLDHFEAE DAAQRVKIGQ ISTSLSQLVH RITELTQGTE TTLGIVDTAQ NQTEQVRAIA
REVSELSSQV EQHAQQTHSQ MLASQEEVQA FMSAADETQQ AVSHCHLSLG SLTTSVNDVS
TILDVIGNIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRNLSQRTQE SLQQVVTILS
QLTEANQQLT LSVEGIASTS QKQAQGAQNL WQVTQTVQQQ SQEMTETAKQ GSRFSVDQAS
HLDSLSQAME SLKQHAMAAA SQSEVIADEV AQGVADIEAS LGIDGQSLDN AA
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