More than 300 homologs were found in PanDaTox collection
for query gene VSAL_II0170 on replicon NC_011313
Organism: Aliivibrio salmonicida LFI1238



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  100 
 
 
543 aa  1078    Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  72.22 
 
 
547 aa  367  1e-100  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1434  methyl-accepting chemotaxis protein  46.28 
 
 
543 aa  280  5e-74  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2017  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
543 aa  267  4e-70  Shewanella sp. ANA-3  Bacteria  normal  0.75882  hitchhiker  0.00000661881 
 
 
-
 
NC_013457  VEA_001231  methyl-accepting chemotaxis protein  32.61 
 
 
542 aa  242  2e-62  Vibrio sp. Ex25  Bacteria  normal  0.554422  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  39.26 
 
 
542 aa  228  2e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
544 aa  225  2e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05136  torS; sensor protein TorS  39.16 
 
 
558 aa  221  3.9999999999999997e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001261  methyl-accepting chemotaxis protein  36.92 
 
 
547 aa  218  1e-55  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0265  methyl-accepting chemotaxis protein  39.26 
 
 
561 aa  218  2e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3672  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
619 aa  218  2e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0070  methyl-accepting chemotaxis protein  38.15 
 
 
547 aa  209  8e-53  Vibrio cholerae O395  Bacteria  normal  0.740118  n/a   
 
 
-
 
NC_009457  VC0395_A0350  toxin co-regulated pilus biosynthesis protein I  38.75 
 
 
620 aa  204  3e-51  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0712  methyl-accepting chemotaxis citrate transducer  39.04 
 
 
546 aa  201  1.9999999999999998e-50  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0771  methyl-accepting chemotaxis protein  36.36 
 
 
661 aa  199  1.0000000000000001e-49  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
499 aa  196  1e-48  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  34.83 
 
 
541 aa  194  3e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2188  histidine kinase  27.91 
 
 
540 aa  193  6e-48  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.035953  normal 
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
656 aa  192  1e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
541 aa  191  2.9999999999999997e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  39.14 
 
 
653 aa  186  7e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  30.99 
 
 
633 aa  185  2.0000000000000003e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
653 aa  184  3e-45  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36 
 
 
568 aa  184  5.0000000000000004e-45  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
716 aa  183  7e-45  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
543 aa  182  1e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  37.05 
 
 
624 aa  182  1e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  38.49 
 
 
653 aa  181  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  32.38 
 
 
712 aa  181  2.9999999999999997e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.12 
 
 
712 aa  180  4.999999999999999e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
541 aa  179  8e-44  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  34.17 
 
 
619 aa  179  9e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  29.86 
 
 
596 aa  179  1e-43  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  32.97 
 
 
541 aa  179  1e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
636 aa  178  2e-43  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  32.76 
 
 
541 aa  178  2e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.64 
 
 
523 aa  178  2e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  33.81 
 
 
546 aa  177  4e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  35.08 
 
 
546 aa  177  5e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  31.61 
 
 
546 aa  177  6e-43  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  28.6 
 
 
564 aa  176  8e-43  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
541 aa  176  8e-43  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
541 aa  176  8e-43  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
541 aa  176  9.999999999999999e-43  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009997  Sbal195_0931  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
541 aa  176  9.999999999999999e-43  Shewanella baltica OS195  Bacteria  normal  normal  0.476721 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
640 aa  174  1.9999999999999998e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
573 aa  174  2.9999999999999996e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  32.18 
 
 
647 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  30.69 
 
 
629 aa  174  3.9999999999999995e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  31.03 
 
 
640 aa  174  3.9999999999999995e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
541 aa  174  3.9999999999999995e-42  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  38.52 
 
 
539 aa  173  5.999999999999999e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  32.27 
 
 
558 aa  173  5.999999999999999e-42  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
637 aa  173  5.999999999999999e-42  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  38.52 
 
 
539 aa  173  6.999999999999999e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
533 aa  173  6.999999999999999e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0921  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
541 aa  173  7.999999999999999e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0897  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
541 aa  173  7.999999999999999e-42  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3441  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
541 aa  173  7.999999999999999e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
541 aa  173  9e-42  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  31.22 
 
 
541 aa  172  1e-41  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  28.65 
 
 
555 aa  172  1e-41  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
773 aa  172  1e-41  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  34.92 
 
 
541 aa  172  1e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  35.55 
 
 
531 aa  172  1e-41  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
639 aa  171  2e-41  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
674 aa  172  2e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  33.41 
 
 
543 aa  171  2e-41  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
541 aa  172  2e-41  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  36.09 
 
 
546 aa  171  3e-41  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  33.41 
 
 
543 aa  171  3e-41  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  33.41 
 
 
543 aa  171  3e-41  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
540 aa  171  3e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  33.41 
 
 
543 aa  171  4e-41  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
650 aa  171  4e-41  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
543 aa  171  4e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
543 aa  170  5e-41  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3685  methyl-accepting chemotaxis protein  29.39 
 
 
546 aa  170  5e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  29.98 
 
 
621 aa  171  5e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
634 aa  170  6e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
543 aa  170  6e-41  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
533 aa  169  8e-41  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
543 aa  169  8e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.92 
 
 
533 aa  169  9e-41  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008740  Maqu_3809  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
547 aa  169  1e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  31.83 
 
 
570 aa  169  1e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.87 
 
 
713 aa  169  1e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
620 aa  169  1e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  34.24 
 
 
533 aa  169  1e-40  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  27.39 
 
 
544 aa  168  2e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4372  methyl-accepting chemotaxis protein  28.8 
 
 
619 aa  168  2e-40  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  31.07 
 
 
551 aa  169  2e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  35.12 
 
 
541 aa  169  2e-40  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
645 aa  167  2.9999999999999998e-40  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.94 
 
 
546 aa  168  2.9999999999999998e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
425 aa  167  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
645 aa  167  2.9999999999999998e-40  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
638 aa  167  2.9999999999999998e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  30.39 
 
 
550 aa  167  4e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2109  histidine kinase, HAMP region: chemotaxis sensory transducer  34.27 
 
 
539 aa  167  5e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.950044  normal  0.0787865 
 
 
-
 
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