| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0216 |
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| Symbol | |
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| ID | 4277950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 237477 |
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| End bp | 239423 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638132970 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_748917 |
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| Protein GI | 114561404 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT CGACCCTATC CCTTAGTGCA TCCGCCTTAT TATTACTGCT TGCGGCATTA
CTCGCCGCTA CCGTGTTATG GAGTAATCAA CAACGGCAAA CCAGTGAAAA ATTAAACCTA
GACTTACAAC ATATTCAACA TACCTTTCAG TATGATGTTC GCCGGAACAT TGATAGTTAC
TTACAAACAG GCCAAAGCAA TTATCTCGAA CAAGCCCGCA GCGATATTAC CCGTATAACC
GACAATATTA CCCAGCTGAG TTCCGCTCAT CCACAGCTTG ATAGTGCTTC ATTAACCAGC
TTAATGACTC AATTAATTAG CGACTTAGAC ACTAAATACC GTGCCGCTGG AAAACTGGCC
GGTAACCCAC GCCAACTACT GGCTTTTGCT GAATCAGAAA TGATCGATTA CAGCCGCAGC
CTACATCGTT ATGCTCAATC AGCTCCGAAT GACTCAAATA CTGTGGAGCA ATATCTTGCG
CTTAGTCTTG AGTTACCTAA CCTAGTTTAT CAACTATCAC AGCAGACGCA GGCCTTACTG
ATTGATCAAG ATGCAGGAGC AAATAATAGC CTTAACTTTT CGATAAACTC TCTCAACACA
TGGCATGATG ATTTGGAGAA GCTATCTTTG CTGGGTATTT ATCGCACCGA AGAAGTGGAT
GAATTCGCCT TAGGCGATGA CGAACCGGAA CGTATTGAAA CGGGTGAAGC CCCTCGCGCA
GAATTGCTGA GTTTGACTCA ACGCTATAGC AAAGAAGTGA GTAATACCAA GCAAATGCTC
AGCGACAATC AACAAGTACA AACTGCGCTA ATTAACGCCA CCAGCCAAGT AGAACAGCAA
CTAGTGACAC TGGCCAATAC ACAAGCCGTA ACCGATGAAC AACTTAAAAT CCGTTTGCAG
TGGTTGCTAT ACACCATGGT GATATTGATA GCATTATTTT CTATTGGTTA TTTAGTGTTA
CAACAACGAC GAGTCGTTAG CCCGCTTAAA CGTTTAAACC GTGCTTTTTC AATGTTAAGC
GAATCGAATC AACGTGAACC ATTACCCGTG ACCAGCCAAT GCGAAACAGG CCAAATTGCG
GCACACTTTA ATCGCCTGTT ACAGCGATTT GAACAAGATG ACGAACAACA AAAAAGTAAT
ATGGCACAGG TGTCTAACTC ATTGAGTGAA TTAGTCGCTA AAATTGGTTC CTTATCAACT
AGCACGCAAC AAACGCAAGA TGTGGTACAA CAAACTCAAT CACAAACCGC TGATTTAATT
ACTCTTGCCA ATGAAGTAAA CCGGTCGTCT AGTTTGGTAA CTGCCAGTGC AGAGCAAACC
ATGCATGATA TGCAAGCAAG CCAACAAGAA GCCCTGGCGG TGTTAGATGC GACCGATCAC
ACTGTCACCA AGGTCAATCA ATGTAACCAC TCACTAACCC AACTCAGTAC ATCGGTTAAT
GACGCAGCTA AAATTGTCGA TGTTATTGGT AATATTGCTG ACCAAACCAA CTTATTGGCA
TTAAATGCCG CCATTGAAGC CGCTCGTGCA GGTGAACAAG GTCGTGGTTT TGCTGTGGTA
GCCGATGAAG TACGCAATTT ATCGCAACGG ACTCAACAAT CATTAAAAGA CATAATGGCT
ATTTTCGAGC AACTAACCCG CTCGAACACA GCACTTAGCC ACAGCGTTAA CGATATCAGC
GAAGCATCTG CACAGCAAAA AGGTCGAGCC CAGAGTTTGT TAGATGTTGC GTTGCAAGTA
CAGCAGCAAG CTCAAGAGAT GGCGAGCAGT GCGAGCCAAG GGAGTGAACA TGCTAAGCAA
CAGGTGGGGC ATCTTGATGA GTTTGTCATC GCGATGGATA GCCTAATGCT GCATGCTAAA
GATGCGTTTG AACAAAGTGA AACGATTGCG CTTGAGGTCA GTAACAGTGT CGATAACATT
GAACAACACT TAGGCATCCG CGGATAA
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| Protein sequence | MKISTLSLSA SALLLLLAAL LAATVLWSNQ QRQTSEKLNL DLQHIQHTFQ YDVRRNIDSY
LQTGQSNYLE QARSDITRIT DNITQLSSAH PQLDSASLTS LMTQLISDLD TKYRAAGKLA
GNPRQLLAFA ESEMIDYSRS LHRYAQSAPN DSNTVEQYLA LSLELPNLVY QLSQQTQALL
IDQDAGANNS LNFSINSLNT WHDDLEKLSL LGIYRTEEVD EFALGDDEPE RIETGEAPRA
ELLSLTQRYS KEVSNTKQML SDNQQVQTAL INATSQVEQQ LVTLANTQAV TDEQLKIRLQ
WLLYTMVILI ALFSIGYLVL QQRRVVSPLK RLNRAFSMLS ESNQREPLPV TSQCETGQIA
AHFNRLLQRF EQDDEQQKSN MAQVSNSLSE LVAKIGSLST STQQTQDVVQ QTQSQTADLI
TLANEVNRSS SLVTASAEQT MHDMQASQQE ALAVLDATDH TVTKVNQCNH SLTQLSTSVN
DAAKIVDVIG NIADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLSQR TQQSLKDIMA
IFEQLTRSNT ALSHSVNDIS EASAQQKGRA QSLLDVALQV QQQAQEMASS ASQGSEHAKQ
QVGHLDEFVI AMDSLMLHAK DAFEQSETIA LEVSNSVDNI EQHLGIRG
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