| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3512 |
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| Symbol | |
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| ID | 4605759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4147122 |
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| End bp | 4149065 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782933 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_929384 |
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| Protein GI | 119776644 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT CGACCCTGTC TCTGGGCGCA TCTGCCTTGC TGTTGGTACT GGCAAGCCTG
ATGGCCGCCA CCCTGTTGTG GACCAGCAAT CAGCGGCAGC AACTGGAATT CCAAACCAGC
GAGCTCAATC GACTGCAGCA ACACTTTGTC ATTGATGTCA GGCGTTTACT CGAGTCATAC
CTCACCAGTG GCGATGCCAG CCGCTTGGAG GACGCACGCA ATCAATTAGC CGAAATGAGC
ACATCGCTGG CAGTATTGGA GCCCTCCCAG GCCAGGTTAC TGGCAAGCAG GCTCGACATC
TTTGGCACCG AACTCGATGG CAAATACCGC GCAGCCGGCA AGCTGGCCGG TAACCCACGC
CAATTGTTAT CCCACGCTGA GACTGAGCTG CTCGACTTTA ACCGCCTGTT GGCCGCCTAT
GCCCGTGAAG GACTGGAAAC CTCGCCCGAC AAGGCAAACC AACTTCTTGA CCTGACTGCC
GAACTCCCTC CCCTTGTTTA CGCCTTGTCC CAGCAAACCC ACGGCTATCT TATTGACAAA
GATACTCGTC TTAAGGGCAT TCTGGATTCG AGTCTGGACA GCCTCGAGCA ATGGCGCGCT
GCGCTCACCA AGGCGCCTTT ACTTGGGCTA CTGGAAACCC TGGATGAAGA TTCTCTGATG
CCCGGCGAAG CCCCCCCACC GGCACAGGAC AGGGCCGAAG GCCTGATAGC CGAACTCGAC
AGTCTCAGCG GACGCTATCG CCGTGAAATC GACAATACCC ACAAGCTGCT GACCGACAAC
CAACAAACCC AGGCCGCGCT GCGCACAGCC ATTGCCGATA CCGAAAGTCT GCTACTCGCC
ATGGTTGACG AGCAGGATCA GCGCAGCCAA CGCCTCAAGC AGCAAATGCA GCTTATTCTC
TATGCCATGG CAGCTGCACT GGCTATCTAT GCCTTCTTCT ATCTGGTGAT ACAGCAAAAA
AGGGTGGTGA AGCCACTCAA ACGACTCAAT CAGGCGTTTA TGCAGCTCAC AGAAACCGGG
CAGCGGCAGC AATTGGATGT CCGCAGTCGT TGCGAAACCG GTCAGATAGC CGGCCACTTT
AACCGTCTGC TGCACCGCTT TGAAGAAGAA GACGAAGCGC AGCGGCACAG GATCAGCGGC
ATTTCAGCCA CCCTCGACCA ACTCAGACGC CAAATCGCCG ACATGGCCAA CAGTGCCGAG
GCCACAGGTG AGATTGTCAC CCAGGCGCAG GAACGCACCG ACGAGTTAAA AATGCTGGCC
AGCGAGGTCA GCGACAACTC CACCCAGGTG GCCAGCGACG CCAACATCAC GGTGGAGCGT
ATGACTCAAA GTCAGGCGGG TGCAGAAGAA ATGCTGAGCG CAATCAAGGA AACCCGCGGT
GCCGTTGAAG ATTGCAATAG CTCACTGCTG AGCCTGAACG GTTCCGTCAG TAAGGTCGCC
GGCATCATAG ACGTGATTGG AAATATCGCC GAACAAACCA ACCTGCTGGC CCTCAACGCC
GCTATCGAAG CTGCCAGAGC CGGAGAACAG GGGCGCGGCT TTGCTGTGGT GGCCGATGAG
GTACGCAGCC TGTCTCAGCG CACCCAGGTT TCGCTCAAGG AAATCCAGAA TATTCTGGGT
GAACTCAAAG GCGCCAGCGA TCAATTGGCA CTGAGAGTGA ATGGCATAGA TTCAGCCACG
GGAACACAGC AACAAAAGGC CAGCCAGCTG TGGGAAGCGG CCGAGGCTGT CCGGGAACAT
GCTGGAGTGA TGGCGGGCAC CGCCGAAGAG GGGCTAAACA ATGCCAGAAC CCAAATGCTC
TGCCTTGAAG CTTTTAACGA CGCCATGACC GCCCTGTTGG CCCAATCAGG TCAGGCAGTC
AAGGATAGCC AGGCCATTGC CGCCGAAGTT GCCACCCAGG TTGCCGCCAT CGAACACGCC
CTGAGTGGCA AGGTACAGAC CTAA
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| Protein sequence | MKISTLSLGA SALLLVLASL MAATLLWTSN QRQQLEFQTS ELNRLQQHFV IDVRRLLESY
LTSGDASRLE DARNQLAEMS TSLAVLEPSQ ARLLASRLDI FGTELDGKYR AAGKLAGNPR
QLLSHAETEL LDFNRLLAAY AREGLETSPD KANQLLDLTA ELPPLVYALS QQTHGYLIDK
DTRLKGILDS SLDSLEQWRA ALTKAPLLGL LETLDEDSLM PGEAPPPAQD RAEGLIAELD
SLSGRYRREI DNTHKLLTDN QQTQAALRTA IADTESLLLA MVDEQDQRSQ RLKQQMQLIL
YAMAAALAIY AFFYLVIQQK RVVKPLKRLN QAFMQLTETG QRQQLDVRSR CETGQIAGHF
NRLLHRFEEE DEAQRHRISG ISATLDQLRR QIADMANSAE ATGEIVTQAQ ERTDELKMLA
SEVSDNSTQV ASDANITVER MTQSQAGAEE MLSAIKETRG AVEDCNSSLL SLNGSVSKVA
GIIDVIGNIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLSQRTQV SLKEIQNILG
ELKGASDQLA LRVNGIDSAT GTQQQKASQL WEAAEAVREH AGVMAGTAEE GLNNARTQML
CLEAFNDAMT ALLAQSGQAV KDSQAIAAEV ATQVAAIEHA LSGKVQT
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