| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0209 |
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| Symbol | |
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| ID | 5611489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 237230 |
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| End bp | 239263 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931035 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001471950 |
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| Protein GI | 157373350 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGC TACAGTTTAG CATTCGACAG AAAATCACCT TTGGCTTTAG CGCTATTGGC
GTGCTGCTCA TTGCTGGCAG CAGCTTTTTC TATTACTCCC TCAGTCAGAT AAACCTTGCC
AACCAAAATG TTGAAACCCT GGCCGTGCCA GTATTAAAGC AGAGTCATGC GCTGCAGCTG
ACACTCCTGA AGATGGTAAA ATTATTAGCC GTCGCCAACA CTCATAAAGA GCGCTCTGAA
CTGGATCGCA GTCACAACCA ATTTATTCAG TTACAAACCC GCTATGACGA GGAGTTATCG
AGGCTTAAGG GCAAAGTCTT AGACCAGAGT AAAATGCTCA ATTCACTTAA TCAGGCCGAA
GTGGAGTTTC AACAATTTCT TGCAGAGAGT AAGAACATGT TTGAGGCAAA GATAGCCATT
ATCGAAGCGA GTTCCAGGTT TCAAGAGCAG TACCGGGAGT TTGAAAGAAA CCGCTTCGAT
GCGAGTAATC TGATGCTGGA TCTGGAGTTG ATTTCGGCTC CCCAAGAGGC GCGCTTGTTA
GAGGAGGTCA TCGGCACAGG CACCCGAATC GACGACATGT TATTTACCAT GGGGAATACC
ATGTCCAGAC TGACTCGAGT CGATATCGCT TCAGGAGTGA CGGCTCATCA GGAAGATATT
GGCTTTTTAA TGAGTAACCT GACAACCAAT TTTGATTTTT TAAGAAGGCA GGCTGAACCC
TTAAATATTC AAGATATTAT GGGAGAGTCT TCCCAGAAAA TAGACTTGCT GAAGCAATAC
TTACTTCAAC CGGGAGACTT GTATCTGTTG CAGCATCGAA TTATTGCCCA AGGGCAACTG
GCGCTGGGAG CTTATACTGA AGGGGAGAAG AGTTTCGCTG CCAGTTATGA ACAACTCGAT
CTGCTGGCCA ATTTAGCCGA CCAACGGCTT GTTCAATTGC AAGCAACGGC AAAAGATAAG
ATATCCGCCG GTGAAACTCT AGCCATTATA CTTGCATTGG TGTTTGTTTT GATGGCGAGT
TTCATCTCAA TCGTTACTTC CAGAGCCATG TTGGGACCCC TTCAATTGGT GAACCAGGCT
CTGGGGCGTA TTGCCGATGG GGACCTGTCT CAGCGTATCA CTAAGCAAAC AGATGATGAG
TTCGGCACCT TGACCGACAA CATCAATAAA TTATCTCAAG ATCTGACTCA GCTGCTCAAT
GAGATTAGTG AGAATGCTCA CTCCCTCGAT GGTTCGGCGT TAGCATCCAG TCAACAGAGT
CAACGTATTG CATCTGTCGC AGCAGAGCAG ATAGAGCGGG TGGAAAATGT CAGAATAAGA
GCAGAGCAGC TGTTCACGAG TTCGACGGTG GTGAAAAATG AAGCCGATAG GACGGCCGAT
AATGTGACTC AGGCATCGGT AAGCAGTCGT GAAATTAAGG GCATAGCATC GACCAACAGC
GAAACGATTC AAAACTTGTC AAACGGGCTC AGTGAATCGG TAGAGGTGAT GTCTCGCTTG
AGTCATCATA GTCAAGATAT CGGTGGGATC TTAGATACAA TTGTTGGTAT CGCCGAACAG
ACCAATCTAT TGGCGCTGAA TGCGGCCATT GAGTCGGCCA GGGCGGGCGA GCATGGCAGG
GGCTTTGCGG TGGTTGCCGA TGAGGTGCGA ACCTTAGCCA TGCGGACGCA AGAGTCTACC
GCCGAGATCC AGACGACAAT CACGGCACTG CAGCAGGAAA CAGAGTCGGT AGCCGAGTCT
ATCTCTCTCG GGCAATCTAA AGCTGCAGAG TGCGTCATTC AGAGTCAGGA GCTGGGGCAG
GCGATTGAAC ATATGGATGC CTCCTTGAAT ACGATTGAAC AGATGAGTAA ACATATTGCT
CAGGTCGCAG ATGAGCAGTT AGCCGATAGT CAGAATATTG AAGTCAGCAT GGGTGAAACC
CTCAATACTG CCAATCAAAA TGCCCAAGAG GCGAGTGGGG TGGCCGACCG TAGTGCCGAG
GTTAATGAAC TCGCGCGTTC ACTTACCCGT TGTGTGAAGC GATTTCGTTT ATAA
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| Protein sequence | MMTLQFSIRQ KITFGFSAIG VLLIAGSSFF YYSLSQINLA NQNVETLAVP VLKQSHALQL
TLLKMVKLLA VANTHKERSE LDRSHNQFIQ LQTRYDEELS RLKGKVLDQS KMLNSLNQAE
VEFQQFLAES KNMFEAKIAI IEASSRFQEQ YREFERNRFD ASNLMLDLEL ISAPQEARLL
EEVIGTGTRI DDMLFTMGNT MSRLTRVDIA SGVTAHQEDI GFLMSNLTTN FDFLRRQAEP
LNIQDIMGES SQKIDLLKQY LLQPGDLYLL QHRIIAQGQL ALGAYTEGEK SFAASYEQLD
LLANLADQRL VQLQATAKDK ISAGETLAII LALVFVLMAS FISIVTSRAM LGPLQLVNQA
LGRIADGDLS QRITKQTDDE FGTLTDNINK LSQDLTQLLN EISENAHSLD GSALASSQQS
QRIASVAAEQ IERVENVRIR AEQLFTSSTV VKNEADRTAD NVTQASVSSR EIKGIASTNS
ETIQNLSNGL SESVEVMSRL SHHSQDIGGI LDTIVGIAEQ TNLLALNAAI ESARAGEHGR
GFAVVADEVR TLAMRTQEST AEIQTTITAL QQETESVAES ISLGQSKAAE CVIQSQELGQ
AIEHMDASLN TIEQMSKHIA QVADEQLADS QNIEVSMGET LNTANQNAQE ASGVADRSAE
VNELARSLTR CVKRFRL
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