| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4309 |
|---|
| Symbol | |
|---|
| ID | 5368107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4886715 |
|---|
| End bp | 4888601 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640806714 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001343139 |
|---|
| Protein GI | 152998304 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00619864 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC GCAGCGCTTT TGAGCAAAGT GATACTTACA CTCAAGTTTG GGAATATGCC
TCTATCGACT TAAAGCAGCA AATTGAAGGC TATTTATCAT CAGGTGAAGC GTCCGCACTG
CAAACAGCGC AAGAGTTTAT TGATAAAAAA ATTCGCCCCG CACTTAGTTC ACTTCCCAAT
ACCATTAAAG ACCCAATAAA TGGACAATTA ATTGAAATAG AAAAAAGTCT TCAATCTGAT
GTGAGAGCCG CTGGCAAGCT ATCCGGAAAC CCTTATGCAT TGATTGAAAA TAATGAAAGA
CAAACCTTGT TATCACTGGA CACTCTGGCT GATAAAGTTG CTTTATTTCA ATCACACCAT
GATCTACAGT CCGCAGCGAT TTACTTAGCA AGCCAAGCTT TGTTATACGC AGACCTTGCT
CATGTGAGTG ATGCAAAAGA CAATTACCTA GCAAAAAGCA CGCCTGAGAA TAAGCAGCGC
TTAGTTCAAT CCATTGAAGT CTTTAAATCT CATATTGCTG ATTTCGGTAA GCTTCCCATA
CTAGAATTAG ACGAAAAACA AGACACAGAG TCTGCTAACG ATTTATCGTC ATTAATGGGG
TGGGCAAGCG ATTCAGAGAG CTCAACGGAA GTGGTTGATC CTCTTGAAGA AACCAAAAGT
GAGCTGCACA CTTGGTCAAG TCGCTATTTA AAAGACGTTG ATTCTAGCCT AATTAATATC
CAACAAGCGG TTACCGCCCA AAATAAGATT CGCTCACTTA TCAATCAACT TGAAGAGATT
TTAAAGGCTG GTACTGAAGA CATTCAAAAA AGCGCTCAGG CCACTCAAGA ACAAACTTTA
GTCGCATTTT CTATCTTCGT CATTTTGATG ATTTTAACTA CTATCTCAGT ACATATTTTT
CAAAATAAGG TCGTGGTAAA AAGCGCTCTA GACTTATACA CAGCGGTAAA AGATTTAGTC
GAGCACCAAA ACATCAACAC CCTAAAAGTC GGCAAGAATA AAAACGAACT ATCAGACGTA
GCCCATTACT TAAACCGCTA CTTGGAACAA ATTGCTGTAC AACGGCAACA ACGAGATACC
GAGTTAAGCA ATATCTCAAT CTCACTCAAT GAGATGCTGA ATGCCTTTGG ACAAGTACAC
GAACTGAGCT CGGCTTCTAG ACACGAACTG GACGACACAC TGAACATGTC GAACCAAGTC
GAAACGCTAG CGAGTAAAGC AGAAGTACGC GCTCAAGAAG TAGCAAATTA TGCCTCTGAA
ACCAATACCG CTATGTCACA CAGCGTGAAT CAGGCAGCAT CTCTGGCACT TGCTAACCAA
ACTACGGTTG AGCGACTTAA TAGCAGTAAA AAGGCATTAA CCAGCTTAAG CTCATCCGTT
TCGAGCGCCT CCTCTATTGT TGGCGGCATC AGAGATATCT CAGAACAAAC TAACTTACTT
GCACTCAATG CCGCTATTGA AGCAGCACGA GCAGGTGAAC ATGGTCGAGG CTTTGCGGTA
GTCGCCTCGG AAGTACGAAG CTTATCAACC AGAACCCAGC AATCCCTAGA GGAGATCACG
AAGATATTTT CACAACTCAC ATCAGCAACT AATAAACTCA CTCAGAATAT AGATTTGATT
GAAACGGCCT CAATTGAACA AATTGATTTG ACCCACGCTC TTGGTCAATC GGCACAAAAT
ATCTTGGAAA AATCTAAGCA ATCTAGTCAT TTAGCGAAAA AAGCAACCGG CTATGCTGCT
GAACAGAAAC TAGGTATGAA CAAGTTAAAC ACCGCCGTCG TCAAAGTAAG AGAGCAAGCC
AATGAATCGG AAGAATTTAT GTCGGCCGTA ACAAAGAACA TCAAGCAAAA AATCCAAGAC
ATTACGACAA CCTTGGGTAT TAGCTAA
|
|---|
| Protein sequence | MKFRSAFEQS DTYTQVWEYA SIDLKQQIEG YLSSGEASAL QTAQEFIDKK IRPALSSLPN
TIKDPINGQL IEIEKSLQSD VRAAGKLSGN PYALIENNER QTLLSLDTLA DKVALFQSHH
DLQSAAIYLA SQALLYADLA HVSDAKDNYL AKSTPENKQR LVQSIEVFKS HIADFGKLPI
LELDEKQDTE SANDLSSLMG WASDSESSTE VVDPLEETKS ELHTWSSRYL KDVDSSLINI
QQAVTAQNKI RSLINQLEEI LKAGTEDIQK SAQATQEQTL VAFSIFVILM ILTTISVHIF
QNKVVVKSAL DLYTAVKDLV EHQNINTLKV GKNKNELSDV AHYLNRYLEQ IAVQRQQRDT
ELSNISISLN EMLNAFGQVH ELSSASRHEL DDTLNMSNQV ETLASKAEVR AQEVANYASE
TNTAMSHSVN QAASLALANQ TTVERLNSSK KALTSLSSSV SSASSIVGGI RDISEQTNLL
ALNAAIEAAR AGEHGRGFAV VASEVRSLST RTQQSLEEIT KIFSQLTSAT NKLTQNIDLI
ETASIEQIDL THALGQSAQN ILEKSKQSSH LAKKATGYAA EQKLGMNKLN TAVVKVREQA
NESEEFMSAV TKNIKQKIQD ITTTLGIS
|
|---|
| |