Gene Shew185_4208 details

Gene Information

• Locus tag: Shew185_4208
• ID: 5373490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 5018139
• End bp: 5020121
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640832473
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001368387
• Protein GI: 153002706
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTT CAACGCTGTC GCTCTCTGCT TCTGCCCTGT TGTTATTGCT CGCGGGATTA 
TTAGCGGCCG TAGTGCTGTG GAGTAGTGAT CAGCGACAAA ATATAGAACA ACAAACACTC 
ACACTGCAAA GCATACAAGA AGACTTCCTC GTCGGCGTAC GCCGCGATCT CGACGGCTAT 
CTCGCCAGCG GCAACTCTAG CCAACTTGAG CAAGCTAAAA CTAAACTCAG CGCCATTAAG 
AACCAGCTCA CAGAGCTTAA TCTCGCCACC ATGGGCGCTA ACGATAATGA CTTGCAAGCA 
AGTCTCAGCA GCTTCATTCA AGATTTAGAT ACCAAGTACC GCGCAGCGGG TAAACTCGCT 
GGCAACCCCA GGCAATTGCT GGCCCACGCC GAATCAGAAA TGCTCGACTA TAACCGTCGT 
TTGGGCAGCT ATGCCGATAA AGGCTTAGCC ACAAATGCGG TGGTCGCCGA ACAATATCTG 
CAATTGAGCC GCGATTTACC TTCCATCGTC TATCAACTTT CCCAGCTGAC CGATGGCTAT 
CTGATCGGCA AAAATCAGCA ACTCAAGGGC ATTTTAGACA GCACCAGCAA AGAGCTAAAT 
ACATGGCACG ACGCCCTCAG CGCACTACCG TTAATCGGTG TATATGAGCA GCAAGAAGCC 
GATGAGTTTG CCCTCGGTGC CAGCGAACCA GAACAGATTG AAGTCGGCGA GAGTGACCGC 
AGTGAACTGC TCAGTCTCGC CAATCGATAC AACAAAGAAG TCGCCAATAC TCACCAATTG 
CTGCAAGCCA ACCAAGAGAT GCAAGATCAG CTCATTCAAG CGATTAGCAA TGTGGAACAA 
CAGCTTATTG GCTTAGGTGA GGCTCAGGCA GCGAAGAATC AACAGCTGAA ATATGAGCTA 
CAACTGATCC TCTACACTAT GGTTTCGATC ATGGCCTTGT TTGCCATAGG TTATTTAGTC 
CTGCAGCAAA ATCGCGTCGT CAAACCGCTG AAACGTCTCA ACCAAGCCTT TATGAAATTA 
AGCGAATCGA ACAGCCGCGA GCGTTTAGAT ATTAATCGTC GCTGCGAGAC GGGCCAAATC 
GCAGGTCATT TCAACCAGTT GCTGCAAAGG TTTGAACAGG AAGACGAAGC ACAGCGCCAA 
CAAATCACTA AGGTTTCTCA ATCATTAAGC CAACTGGTTG CGCGCATTAC TCAGCTATCG 
CAGCACACAG AGCACACTCA GACGATTGTG GCCGATACGC AAACACAGAC CGAGCATATC 
CGCAGCCTCG CCAATGAGGT GAGCCACACT TCGGCACTCG TGGAAGACAG CGCCGCCGAA 
ACCATGCGCC AAATGCAGTC GAGCCAAACT GAAGCCGAGG CCGTACTCAG CGCAACTGAG 
CAGACGCAAA CCGCCGTTGG CCTTTGCCAT GCTTCCCTTG AAAGCCTGAA TAACTCAGTG 
ACGGATGTGT CTAAAATCAT TGATGTAATT GGCAATATCG CCGAACAAAC TAACTTACTC 
GCCCTCAATG CCGCCATTGA AGCTGCGCGG GCGGGAGAGC AAGGTCGCGG CTTTGCCGTG 
GTTGCCGATG AAGTGCGAAA TTTAAGTCAG CGCACCCAAG TGTCCTTAAA CGAAATCGTG 
AAGATTCTGC AGCAACTGAC CCAATCGAAT CATGCCCTCA GTGAGAGTGT CGATGGCATA 
GCACAGGCCA CCAGCAGTCA AAAACTGCGC GCTCAAAGCC TATGGCAAGT GGCGCAAACG 
GTGCAAAACC AAGCGAGCGA CATGGCCAAT ACCGCTAAAC AAGGCTCGCT CAATGCCAAG 
GAGCAAGTCG ATTATCTCGA TCAATTTGTG CGCACTATGG ATAGCTTAAA AGAGCAGGCG 
CAAACCAGTT CACAACAGAG TGAAGTCATT GCCCAAGAAG TGCAGCAGAG CGTCGAAGAC 
ATTGAAACCA GTTTAGGCAT TGCCGATGCT GGTAACTTAG CACCACAGTC GCGGGCCGCT 
TAA 

 

Protein sequence

MKISTLSLSA SALLLLLAGL LAAVVLWSSD QRQNIEQQTL TLQSIQEDFL VGVRRDLDGY 
LASGNSSQLE QAKTKLSAIK NQLTELNLAT MGANDNDLQA SLSSFIQDLD TKYRAAGKLA 
GNPRQLLAHA ESEMLDYNRR LGSYADKGLA TNAVVAEQYL QLSRDLPSIV YQLSQLTDGY 
LIGKNQQLKG ILDSTSKELN TWHDALSALP LIGVYEQQEA DEFALGASEP EQIEVGESDR 
SELLSLANRY NKEVANTHQL LQANQEMQDQ LIQAISNVEQ QLIGLGEAQA AKNQQLKYEL 
QLILYTMVSI MALFAIGYLV LQQNRVVKPL KRLNQAFMKL SESNSRERLD INRRCETGQI 
AGHFNQLLQR FEQEDEAQRQ QITKVSQSLS QLVARITQLS QHTEHTQTIV ADTQTQTEHI 
RSLANEVSHT SALVEDSAAE TMRQMQSSQT EAEAVLSATE QTQTAVGLCH ASLESLNNSV 
TDVSKIIDVI GNIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRNLSQ RTQVSLNEIV 
KILQQLTQSN HALSESVDGI AQATSSQKLR AQSLWQVAQT VQNQASDMAN TAKQGSLNAK 
EQVDYLDQFV RTMDSLKEQA QTSSQQSEVI AQEVQQSVED IETSLGIADA GNLAPQSRAA