| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3813 |
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| Symbol | |
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| ID | 4254376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4552972 |
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| End bp | 4554948 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120458 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_735933 |
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| Protein GI | 113972140 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0320682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT CAACGCTGTC ACTCTCAGCT TCGGCGCTGT TGTTATTGCT TGCTGGACTA
TTAGCAGCCG TAGTGCTGTG GAGCAGCGAC CAAAGGCAAC AGATTGAGCA ACAAACCCAA
GTACTTCAAG GCCTACAACA GGATTTTCTC GTAGGGGTGC GCCGCGATCT CGATGGCTAT
TTAGCCAGTG GTAACGCGAC CCAACTCGAA GAAGCCAAAG CCAAACTGAG CAAGATTAAA
ACTGAGCTCA GCGAGCTCAA CCTCGCCGCA GCGGGCAGTG CCGATGAGGA ATTACAAACT
GGCCTTAGCC AATTCATTCA AGACTTAGAC ACTAAATACC GCGCCGCAGG CAAACTCGCT
GGCAACCCAA GACAACTGCT GGCCCACGCC GAATCTGAAA TGCTCGACTA TAACCGCCGG
CTCGGCAGTT ACGCCGACAA AGGCTTAGCG ATTAATGCCA CTGTGGCCGA ACAATATCTG
CAATTAAGCC GTGACTTACC CAGCATTGTT TATCAATTAT CGCAGCTTAC CGATGGCTAT
CTCATCGATA AAAATCAGCA ACTTAAAAAT ATTCTCGACA GCACCAGCAA GGAGCTAAAC
CAATGGCGTG ACCGACTGAA CGCCTTGCCG TTAATCGGCG TGTTCGAGCA GCAGGAAGCC
GATGAATTTG CCCTCGGTGC GAGTGAGCCA GAACAAATTG AAGTGGGCGA AAATGATCGC
AGCGAGCTGT TAAGCCTTGC CAACCGATAC AATAAAGAAG TCGCCAACAC CCACCGACTG
CTGCAAGCCA ATCAGGAAAT GCAAGAGCAG TTAATTCAAG CCATTAGCAG AGTTGAACAG
CAGCTCATCG CACTCGGTGA GGCGCAGGCC GCCAAAAACC AACAGCTCAA ATATGAGTTA
CAAGTCATTC TTTATGCGAT GGTTTCGATT ATGGCGCTGT TTGCTATCGG CTATTTAATC
CTGCAACAGA ACCGTGTGGT TAAACCCCTT AAACGCCTCA ATCAAGCCTT TATGCAATTA
AGCGAGTCTA ACAGTCGTGA ACGCTTGGAC ATCAATCGCC GCTGCGAAAC CGGCCAAATT
GCAGGCCATT TCAATCAATT ACTGCACAGA TTCGAGCAAG AAGACGAACT CCAGCGCCAA
CAAATGACTA AAGTATCCCA ATCCTTAAGT CAGTTGGTCG CGCGCATTAC ACAACTGTCG
CAGCACACCG AACACACTCA GACCATAGTT GCCGACACTC AGTCGCAAAC CGAGCATATC
CGCAGCCTCG CCAATGAGGT CAGCCACACC TCGGCCCTTG TTGAACAAAG CGCGGCCGAA
ACCATGCGCC AAATGCAGTC GAGCCAAACC GAGGCCGAAG CCGTGCTGAG TGCCACAGAG
CAAACTCAAA CGGCGGTTGG CCTTTGCCAT GCCTCGCTCG AAAGCCTGAA TAACTCAGTG
GCAGATGTCG CTAAAATCAT TGATGTGATT GGTAATATTG CCGAGCAAAC CAATCTGTTG
GCACTTAATG CCGCTATCGA AGCCGCCCGT GCAGGCGAAC AAGGTCGCGG TTTTGCCGTG
GTCGCCGATG AAGTGCGAAG CCTAAGTCAA CGCACTCAAG TGTCGTTAAA TGAAATCGTG
AAGATCCTGC ATCAGCTCAC CCAGTCTAAC CTCGCACTCG GCGAGAGTGT CGATGGCATT
GCCCAAGCGA CCGATAGCCA AAAACAGCGG GCACAGAGCC TATGGCATGT GGCACAAACC
GTGCAAAATC AAGCGAGTGA AATGGCCAAT ACCGCCAAGC AGGGTTCGCT TAACGCCAAG
GAGCAGGTCG ATTACCTCGA TGAATTTGTT CGCAGCATGG ATAACCTAAA AGACCAAGCG
CAAACCAGTT CGCAGCAAAG CGAAGTGATA GCCCAAGAAG TACAGCAAAG CGTGGAAGAT
ATTGAGACCA GCCTAGGCAT AGCCGACACC AACACAGTAT CTGCCCGAGC GGCTTAA
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| Protein sequence | MKISTLSLSA SALLLLLAGL LAAVVLWSSD QRQQIEQQTQ VLQGLQQDFL VGVRRDLDGY
LASGNATQLE EAKAKLSKIK TELSELNLAA AGSADEELQT GLSQFIQDLD TKYRAAGKLA
GNPRQLLAHA ESEMLDYNRR LGSYADKGLA INATVAEQYL QLSRDLPSIV YQLSQLTDGY
LIDKNQQLKN ILDSTSKELN QWRDRLNALP LIGVFEQQEA DEFALGASEP EQIEVGENDR
SELLSLANRY NKEVANTHRL LQANQEMQEQ LIQAISRVEQ QLIALGEAQA AKNQQLKYEL
QVILYAMVSI MALFAIGYLI LQQNRVVKPL KRLNQAFMQL SESNSRERLD INRRCETGQI
AGHFNQLLHR FEQEDELQRQ QMTKVSQSLS QLVARITQLS QHTEHTQTIV ADTQSQTEHI
RSLANEVSHT SALVEQSAAE TMRQMQSSQT EAEAVLSATE QTQTAVGLCH ASLESLNNSV
ADVAKIIDVI GNIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLSQ RTQVSLNEIV
KILHQLTQSN LALGESVDGI AQATDSQKQR AQSLWHVAQT VQNQASEMAN TAKQGSLNAK
EQVDYLDEFV RSMDNLKDQA QTSSQQSEVI AQEVQQSVED IETSLGIADT NTVSARAA
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