Gene Daud_0680 details

Gene Information

• Locus tag: Daud_0680
• ID: 6027674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: -
• Start bp: 715748
• End bp: 717787
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641593509
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001716846
• Protein GI: 169830864
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGCGC CTGTGGCGGG CGGTGGAAGA AAGCCCGAAA AACTCGGCAA CATCGGGCTT 
TTTCGCCAAT GGGAAACTCC GGATGTCCAA TGTTTCAGAG TCAAAAACTA CGAGATAAGG 
CAGGTGTCCG CTGTGAGAAA ACTGAGGATG CGGCTTCGGG TGAAGCTTAC CCTGATGATG 
GTGTTCCTCC TGGCGCTGGC GGTGGCCTCG GCCGGGTTGC TGTCCTACCG CCAGGCCAGT 
ACCGGGATCT ACGGACTGAT GCACCAAGAT CTTGTGAAAA GCGCCCAGGT GTACGGCGAA 
ATGGTTGACC TTTACCTGGA CCAGCGCCGC GCGGACGTGG AGGTGATGGC CAAGCACCCC 
GTCCTGCGGG ACCCCGGGGC ACCGGCGGCG GAAAAGGCGG CGGTGCTGCG CACGTACCTC 
CAGGCGTACG ACTGCTACCA CACCATTTCC GTCACCGACA CCGCGGGCAT CCAGATCGCC 
GACACCAGCG GCATCACCGG CGACGACAAG AGCGACCTGG GTTGGTTCCA GGAAGCCCGT 
GACGGAAAGG TGCACATCTC GAGCATACGC ATGTCCCGGG ACCTGGGCCT GCCCATTGTC 
AACTTCGCCG CCCCCATCTA CGACGACACC GGCGCGTTCA CCGGCGCCAT CACGGCCCGG 
CTGAACCTCG ACAAGACGAT CTGGAAAATC ATCGACGGGT ACGCCGAAAG GTCGAAGGCC 
GTCGGCCGGC CCTCGGCCTA CGCTTATCTG ATCGACTCCC AGGGAATCAT CATCGCCCAC 
CCGGACAAGG AGATGATTCT CCGGGACGAC CTCCGGCAGT TGGGCGTCCC CGAATTGGCG 
GAGGCCGGCG AACGAATGAT CCGGGGAGAG ACCGGCGTGG TCGCCTACAC CTTCCGCGGG 
GTTCCGAAGC ACGTGGGTTT CGCCCCGCTG GACGGATACG GCAACTACCG GGGCCAGGGC 
TGGTCCATCG CCGCCGGGGT CGACGAACGC GAATTGCTGG CACCGCTCGT GGCCATCCGC 
AACGGCGCCT TCGCCGTGGG CGGGGCGGTG CTCCTGGTCG GCCTGGTTGC CGCGGGATGG 
TTCGCGGTGC GGCTCACCGC CCCGTTGCGC CGGATGATCG AGGAGGCCAA CAAGGTGGGC 
GAGGGGGACC TGACCCGCCG CTTGGAGACC AAGAGCACCG ACGAGATCGG CGAACTCGCC 
GCGGCCTTCA ATCAGATGGT CGACGCCCTC CGGGGGCTGG TCGCCCGCGT GGGCGAAAGC 
AGCGCGAACC TCGCGGCGCA GAGCCAGGAG ATCTCGGCCT CCAGCGAGGA GGTCGCCTCG 
GTGATGGACC AGGTGGCCGG CAGCACCACC CAGGTGGCCG CCACCGCCGA ACAGGCCTCG 
AGCGGAGCGC AGGCCCTGGT CCAGTCAGCC GAAAAGATGA AGCACGCGGC GCTCGGCGGA 
AACAAGCACG TTTTTCAGTC GGTGAAAACC ATCGAATCCA CCCAGGAGGC CACAAAACGG 
ATCACCGCAA GCACCAAGGA ACTAGAGCAG AGGACGGGCA AGGTTTCCCA GATCACCAGG 
GTGATCACCG ATATAGCCGA TCAGACCAAC CTGCTGGCCT TAAACGCCGC CATCGAGGCC 
GCCCGGGCCG GGGAGCAGGG CCGCGGCTTC GCGGTCGTGG CCGAGGAGGT GCGCAAGCTG 
GCCGAGCAAT CGGCGGGAGC GGCCAAGGAG ATCTCGCAGA TCGTCAGCGA GATCGGGCGG 
GGCATGCAGG CGGTGAGCAG CAGCACGGAC GCGACTGCCG CCGCCGTCGC CAAGGGGGTG 
GAAACCGCCC GGCAGGCCGG CGACGCCTTC AAGGAGATCG TCAAGACCGT CAGGGAAAAC 
ATCGAAATGA TCGAGCAGAT CGCCCAAGGC AGCAAGCAGA CCAGCAACGC CACCCAGAAC 
CTGGCCGCCT CGGTGGAAGA GGTCTCTTCC ACCATGGAAG AGCTCACCAG TTCGTCTCAG 
GAACTAGCGC GCCTGGCCGA CGAACTGGCC GTCCTGGTGC GCCGGTTCCG CTTGGACTGA 

 

Protein sequence

MAAPVAGGGR KPEKLGNIGL FRQWETPDVQ CFRVKNYEIR QVSAVRKLRM RLRVKLTLMM 
VFLLALAVAS AGLLSYRQAS TGIYGLMHQD LVKSAQVYGE MVDLYLDQRR ADVEVMAKHP 
VLRDPGAPAA EKAAVLRTYL QAYDCYHTIS VTDTAGIQIA DTSGITGDDK SDLGWFQEAR 
DGKVHISSIR MSRDLGLPIV NFAAPIYDDT GAFTGAITAR LNLDKTIWKI IDGYAERSKA 
VGRPSAYAYL IDSQGIIIAH PDKEMILRDD LRQLGVPELA EAGERMIRGE TGVVAYTFRG 
VPKHVGFAPL DGYGNYRGQG WSIAAGVDER ELLAPLVAIR NGAFAVGGAV LLVGLVAAGW 
FAVRLTAPLR RMIEEANKVG EGDLTRRLET KSTDEIGELA AAFNQMVDAL RGLVARVGES 
SANLAAQSQE ISASSEEVAS VMDQVAGSTT QVAATAEQAS SGAQALVQSA EKMKHAALGG 
NKHVFQSVKT IESTQEATKR ITASTKELEQ RTGKVSQITR VITDIADQTN LLALNAAIEA 
ARAGEQGRGF AVVAEEVRKL AEQSAGAAKE ISQIVSEIGR GMQAVSSSTD ATAAAVAKGV 
ETARQAGDAF KEIVKTVREN IEMIEQIAQG SKQTSNATQN LAASVEEVSS TMEELTSSSQ 
ELARLADELA VLVRRFRLD