More than 300 homologs were found in PanDaTox collection
for query gene Pmen_0782 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  62.87 
 
 
670 aa  788    Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_008463  PA14_58650  putative chemotaxis transducer  73.08 
 
 
673 aa  912    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0782  methyl-accepting chemotaxis sensory transducer  100 
 
 
676 aa  1332    Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_009656  PSPA7_5137  putative chemotaxis transducer  73.67 
 
 
673 aa  924    Pseudomonas aeruginosa PA7  Bacteria  normal  0.459514  n/a   
 
 
-
 
NC_007492  Pfl01_0789  chemotaxis sensory transducer  71.6 
 
 
676 aa  925    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.377611  normal  0.0840542 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
676 aa  365  2e-99  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  33.66 
 
 
679 aa  290  5.0000000000000004e-77  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
541 aa  273  9e-72  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  48.36 
 
 
624 aa  271  2.9999999999999997e-71  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  45.04 
 
 
712 aa  265  2e-69  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
716 aa  259  1e-67  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42.86 
 
 
712 aa  259  2e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.54 
 
 
637 aa  254  4.0000000000000004e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  44.92 
 
 
552 aa  252  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
638 aa  249  8e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
541 aa  246  6.999999999999999e-64  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  43.1 
 
 
713 aa  246  9.999999999999999e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  44.1 
 
 
543 aa  246  9.999999999999999e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
638 aa  243  6e-63  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
638 aa  242  2e-62  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  40.26 
 
 
653 aa  242  2e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  43.13 
 
 
559 aa  240  5e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  44.11 
 
 
638 aa  238  2e-61  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
541 aa  238  3e-61  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
650 aa  237  6e-61  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
541 aa  236  7e-61  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  39.49 
 
 
658 aa  236  8e-61  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
552 aa  236  9e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
541 aa  236  1.0000000000000001e-60  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
541 aa  236  1.0000000000000001e-60  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_010501  PputW619_4890  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
541 aa  236  1.0000000000000001e-60  Pseudomonas putida W619  Bacteria  normal  0.452969  normal  0.355365 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
674 aa  233  7.000000000000001e-60  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  40.79 
 
 
653 aa  233  8.000000000000001e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
640 aa  233  1e-59  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
666 aa  232  1e-59  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
568 aa  232  2e-59  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4141  chemotaxis transducer  43.98 
 
 
541 aa  232  2e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
634 aa  232  2e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.02 
 
 
636 aa  232  2e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  44.95 
 
 
545 aa  232  2e-59  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  43.2 
 
 
638 aa  231  3e-59  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  40.71 
 
 
672 aa  231  3e-59  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  39.32 
 
 
541 aa  230  7e-59  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
533 aa  229  8e-59  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.63 
 
 
533 aa  229  9e-59  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  40.57 
 
 
541 aa  229  1e-58  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  42.53 
 
 
411 aa  229  1e-58  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  42.66 
 
 
652 aa  229  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.61 
 
 
548 aa  229  2e-58  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
653 aa  228  2e-58  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
558 aa  229  2e-58  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
533 aa  227  4e-58  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  39.59 
 
 
564 aa  228  4e-58  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
541 aa  226  9e-58  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  40.24 
 
 
681 aa  226  9e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009656  PSPA7_2234  putative chemotaxis transducer  45.57 
 
 
545 aa  226  9e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  43.37 
 
 
541 aa  226  9e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  40.34 
 
 
638 aa  226  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  42.68 
 
 
640 aa  226  1e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
522 aa  226  1e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.38 
 
 
642 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  40.06 
 
 
570 aa  225  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  44.58 
 
 
560 aa  225  2e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  44.7 
 
 
647 aa  226  2e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
634 aa  225  2e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  41.97 
 
 
541 aa  224  3e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  42.68 
 
 
629 aa  224  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  42.22 
 
 
676 aa  224  3e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  43.1 
 
 
544 aa  224  4e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
572 aa  224  4e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  39.94 
 
 
542 aa  224  4.9999999999999996e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  41.13 
 
 
634 aa  223  8e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
541 aa  223  9e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  41.53 
 
 
626 aa  223  9e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
552 aa  223  9.999999999999999e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
646 aa  223  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  41.69 
 
 
541 aa  223  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
552 aa  223  9.999999999999999e-57  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  41.02 
 
 
533 aa  222  1.9999999999999999e-56  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  39.2 
 
 
555 aa  222  1.9999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  37.82 
 
 
642 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  42.22 
 
 
647 aa  222  1.9999999999999999e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
628 aa  221  1.9999999999999999e-56  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
541 aa  222  1.9999999999999999e-56  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
544 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
637 aa  222  1.9999999999999999e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  43.59 
 
 
714 aa  221  3e-56  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  44.05 
 
 
634 aa  221  3.9999999999999997e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  41.23 
 
 
546 aa  221  3.9999999999999997e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  43.59 
 
 
714 aa  221  3.9999999999999997e-56  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  40.11 
 
 
650 aa  220  5e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.25 
 
 
628 aa  220  6e-56  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  38.24 
 
 
643 aa  220  7e-56  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  40.17 
 
 
633 aa  220  7e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
541 aa  220  7e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  38.04 
 
 
568 aa  219  1e-55  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  44.65 
 
 
561 aa  219  1e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
573 aa  219  1e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
438 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  39.67 
 
 
647 aa  219  1e-55  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
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