Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0622 |
Symbol | |
ID | 3712379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 730897 |
End bp | 732843 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_346355 |
Protein GI | 77456850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA AGTTGCTCAC CAATCTCAAT ACTCTGTTGC TGGTCGCCGT CTGCGTGGCC CTCGGCGCCA CGCTGTGGTG GTCGCAAAAA GCCCTGGAGC GCCCGTATCT GTTGATGGAG CGTTACCTGG GGCTGTCGCA GCAATTTCAG AATGTCGTGG CACGCAACGT CGAGGATTAC CTCGCCAGCG GCGACGCCCT GCGCCTGAGC AGCGCCAGTC AGGCCATCGA TGATTTGCAG AAAGAACTCG GTGAGCTGCC GCCCGCGCTG GCCGACACCT TGCGCCCGAG CCTCGCCGAC CTCGATGGGT TCAGCAAGAC CGACCTGCTG GCCGCCGGCA AACTGGCCGG CGATCCGCAG GCCCTGCTGC TGCAGGCCGA GCGCGAATTG AGCGCCAGTC TCGATCAACT CAGCACCTAC GCCGGCGGCA ATGCGACTTA CCTAACGCCC CTGCTGATTG CCTCTCAACA TCTGGGCAAA CTGTCGCTGG CCCGAGACAA ACTGGTCAGC AGCGGACGCA GTGAACTGGC CGCCGATGTC GAGCGCGAAG TCAGCAACAT CCGCGCCCAG GCCCAGACAA TCGATGCCCT GCCCTTGCTC GGCGTGGTCG CCAGCAGTGA GTCCGGCAGC GACGACTTCG CCGCGATGAT GGGCATCGAA AGCACAGCAA AAGCCGCCGC CGAAGATGCC GGGGTCGGCC TCAAACGCGA ACTCAACAGT TTGCTCGGTC GATACCCGGC GGAACTGGCG CGCACCCGCG AGCAGATCCA GAAACGCACC GATCTGAGCA CCGCGACTCA CCAGAAAATC GCCGCCGTGC AACAAGCCAT CGCCGGTCTC GAACCCGTGG TGCGCGCCCA GCACGGGCAG ATCCAGGGCG AAGTGCGGCT GATGCAAGGC GTGATGATCG GCCTGATTCT GCTGATCGCG CTGCTGATCG ACACCCTGCA GCGACGCCTG GCCCGCACCC TGACCAACCT CGCGCCGGCG CTGTCGACCT GGGCCGAAGG CGATTTCAGC CGCGACATTC ATCTGGGCAA GACCAACCGC GAACTGCACG ACATCGAAGC CTCGCTCAAT CGCCTGCGCG CCTATCTGGT GGATCTCGTC GGGACGATTC GCGGCAATGC CGAGCAAGTG GCCGGCAGCA GCCGCACCCT CGCCGAGCTG AGCAATGACT TGCACAGCGG TGCCGAACAT CAGGCCGGCG ATACCGCGCT GATCCGTGAT TCCCTCGGCG AACTGGAAGC GACCATCCAG CAGGTGGCCG GCGATGCACG GCAGGCCGCC GACGCCAGCC GCCATGCCGG GCTGGCCGTC GAACACGGGC AACAAGTGAT CGGCCAGAGC CTCACCGGTC TGCACGCGTT GGTCGGCGAA GTGCAAGGCA ATGCTCAGAT GATCGAACAC CTGGCCGAAG AGTCGGCAAC CATCGGCGGC GTGCTGACGG TGATCCGCTC GATTGCCGAC CAGACCAACC TGCTGGCGCT CAACGCGGCG ATCGAAGCCG CCCGCGCCGG GGAAATGGGC CGCGGGTTTG CCGTGGTGGC CGAGGAAGTG CGCTCGCTGG CACAACGCAC CGCCGGCGCC ACCGCCGAAA TCCAGACCCT GATCGCCGGC CTGCAAACCG CCGCCCGGCA ATCGGTCGAG GGCATGCGCG CGCAGGTCGA ACATGCCGAG GCCACGGCCA ATCAGGCGCA ATCGGCGGAC GGGGCACTGG ACAAGATTGT CGGCGCGATC CAGACCATCT CCGACACCGC GATCCGCATC GCCGACATCA CCGCGCAACA GAGCGGTGCG GTCAGCGAGA TCCGCGATCA CAGCGAACGG ATTCACCAAT TGGGCGGGGA CAATCTGCTG CGCATCGGTC AGGGCCGCGA GCAAGGCGAG AACCTGCTGT TGCTGGGCGG TCAGCTGCAC ACTGCCGTGC AGGCGTTCCG CGTGTGA
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Protein sequence | MRLKLLTNLN TLLLVAVCVA LGATLWWSQK ALERPYLLME RYLGLSQQFQ NVVARNVEDY LASGDALRLS SASQAIDDLQ KELGELPPAL ADTLRPSLAD LDGFSKTDLL AAGKLAGDPQ ALLLQAEREL SASLDQLSTY AGGNATYLTP LLIASQHLGK LSLARDKLVS SGRSELAADV EREVSNIRAQ AQTIDALPLL GVVASSESGS DDFAAMMGIE STAKAAAEDA GVGLKRELNS LLGRYPAELA RTREQIQKRT DLSTATHQKI AAVQQAIAGL EPVVRAQHGQ IQGEVRLMQG VMIGLILLIA LLIDTLQRRL ARTLTNLAPA LSTWAEGDFS RDIHLGKTNR ELHDIEASLN RLRAYLVDLV GTIRGNAEQV AGSSRTLAEL SNDLHSGAEH QAGDTALIRD SLGELEATIQ QVAGDARQAA DASRHAGLAV EHGQQVIGQS LTGLHALVGE VQGNAQMIEH LAEESATIGG VLTVIRSIAD QTNLLALNAA IEAARAGEMG RGFAVVAEEV RSLAQRTAGA TAEIQTLIAG LQTAARQSVE GMRAQVEHAE ATANQAQSAD GALDKIVGAI QTISDTAIRI ADITAQQSGA VSEIRDHSER IHQLGGDNLL RIGQGREQGE NLLLLGGQLH TAVQAFRV
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