Gene Pfl01_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0622 
Symbol 
ID3712379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp730897 
End bp732843 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content65% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_346355 
Protein GI77456850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA AGTTGCTCAC CAATCTCAAT ACTCTGTTGC TGGTCGCCGT CTGCGTGGCC 
CTCGGCGCCA CGCTGTGGTG GTCGCAAAAA GCCCTGGAGC GCCCGTATCT GTTGATGGAG
CGTTACCTGG GGCTGTCGCA GCAATTTCAG AATGTCGTGG CACGCAACGT CGAGGATTAC
CTCGCCAGCG GCGACGCCCT GCGCCTGAGC AGCGCCAGTC AGGCCATCGA TGATTTGCAG
AAAGAACTCG GTGAGCTGCC GCCCGCGCTG GCCGACACCT TGCGCCCGAG CCTCGCCGAC
CTCGATGGGT TCAGCAAGAC CGACCTGCTG GCCGCCGGCA AACTGGCCGG CGATCCGCAG
GCCCTGCTGC TGCAGGCCGA GCGCGAATTG AGCGCCAGTC TCGATCAACT CAGCACCTAC
GCCGGCGGCA ATGCGACTTA CCTAACGCCC CTGCTGATTG CCTCTCAACA TCTGGGCAAA
CTGTCGCTGG CCCGAGACAA ACTGGTCAGC AGCGGACGCA GTGAACTGGC CGCCGATGTC
GAGCGCGAAG TCAGCAACAT CCGCGCCCAG GCCCAGACAA TCGATGCCCT GCCCTTGCTC
GGCGTGGTCG CCAGCAGTGA GTCCGGCAGC GACGACTTCG CCGCGATGAT GGGCATCGAA
AGCACAGCAA AAGCCGCCGC CGAAGATGCC GGGGTCGGCC TCAAACGCGA ACTCAACAGT
TTGCTCGGTC GATACCCGGC GGAACTGGCG CGCACCCGCG AGCAGATCCA GAAACGCACC
GATCTGAGCA CCGCGACTCA CCAGAAAATC GCCGCCGTGC AACAAGCCAT CGCCGGTCTC
GAACCCGTGG TGCGCGCCCA GCACGGGCAG ATCCAGGGCG AAGTGCGGCT GATGCAAGGC
GTGATGATCG GCCTGATTCT GCTGATCGCG CTGCTGATCG ACACCCTGCA GCGACGCCTG
GCCCGCACCC TGACCAACCT CGCGCCGGCG CTGTCGACCT GGGCCGAAGG CGATTTCAGC
CGCGACATTC ATCTGGGCAA GACCAACCGC GAACTGCACG ACATCGAAGC CTCGCTCAAT
CGCCTGCGCG CCTATCTGGT GGATCTCGTC GGGACGATTC GCGGCAATGC CGAGCAAGTG
GCCGGCAGCA GCCGCACCCT CGCCGAGCTG AGCAATGACT TGCACAGCGG TGCCGAACAT
CAGGCCGGCG ATACCGCGCT GATCCGTGAT TCCCTCGGCG AACTGGAAGC GACCATCCAG
CAGGTGGCCG GCGATGCACG GCAGGCCGCC GACGCCAGCC GCCATGCCGG GCTGGCCGTC
GAACACGGGC AACAAGTGAT CGGCCAGAGC CTCACCGGTC TGCACGCGTT GGTCGGCGAA
GTGCAAGGCA ATGCTCAGAT GATCGAACAC CTGGCCGAAG AGTCGGCAAC CATCGGCGGC
GTGCTGACGG TGATCCGCTC GATTGCCGAC CAGACCAACC TGCTGGCGCT CAACGCGGCG
ATCGAAGCCG CCCGCGCCGG GGAAATGGGC CGCGGGTTTG CCGTGGTGGC CGAGGAAGTG
CGCTCGCTGG CACAACGCAC CGCCGGCGCC ACCGCCGAAA TCCAGACCCT GATCGCCGGC
CTGCAAACCG CCGCCCGGCA ATCGGTCGAG GGCATGCGCG CGCAGGTCGA ACATGCCGAG
GCCACGGCCA ATCAGGCGCA ATCGGCGGAC GGGGCACTGG ACAAGATTGT CGGCGCGATC
CAGACCATCT CCGACACCGC GATCCGCATC GCCGACATCA CCGCGCAACA GAGCGGTGCG
GTCAGCGAGA TCCGCGATCA CAGCGAACGG ATTCACCAAT TGGGCGGGGA CAATCTGCTG
CGCATCGGTC AGGGCCGCGA GCAAGGCGAG AACCTGCTGT TGCTGGGCGG TCAGCTGCAC
ACTGCCGTGC AGGCGTTCCG CGTGTGA
 
Protein sequence
MRLKLLTNLN TLLLVAVCVA LGATLWWSQK ALERPYLLME RYLGLSQQFQ NVVARNVEDY 
LASGDALRLS SASQAIDDLQ KELGELPPAL ADTLRPSLAD LDGFSKTDLL AAGKLAGDPQ
ALLLQAEREL SASLDQLSTY AGGNATYLTP LLIASQHLGK LSLARDKLVS SGRSELAADV
EREVSNIRAQ AQTIDALPLL GVVASSESGS DDFAAMMGIE STAKAAAEDA GVGLKRELNS
LLGRYPAELA RTREQIQKRT DLSTATHQKI AAVQQAIAGL EPVVRAQHGQ IQGEVRLMQG
VMIGLILLIA LLIDTLQRRL ARTLTNLAPA LSTWAEGDFS RDIHLGKTNR ELHDIEASLN
RLRAYLVDLV GTIRGNAEQV AGSSRTLAEL SNDLHSGAEH QAGDTALIRD SLGELEATIQ
QVAGDARQAA DASRHAGLAV EHGQQVIGQS LTGLHALVGE VQGNAQMIEH LAEESATIGG
VLTVIRSIAD QTNLLALNAA IEAARAGEMG RGFAVVAEEV RSLAQRTAGA TAEIQTLIAG
LQTAARQSVE GMRAQVEHAE ATANQAQSAD GALDKIVGAI QTISDTAIRI ADITAQQSGA
VSEIRDHSER IHQLGGDNLL RIGQGREQGE NLLLLGGQLH TAVQAFRV