| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3904 |
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| Symbol | |
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| ID | 4257936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4638973 |
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| End bp | 4640949 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124593 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_739938 |
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| Protein GI | 114049388 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.202773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.313356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT CAACGCTGTC ACTCTCAGCT TCGGCGCTGT TGTTATTGCT TGCTGGACTA
TTAGCAGCCG TAGTGCTGTG GAGCAGCGAC CAAAGGCAAC AGATTGAGCA ACAAACCCAA
GTGCTTCAAG GCCTACAACA GGATTTTCTC GTAGGGGTAC GCCGCGATCT TGATGGCTAT
TTAGCCAGTG GTAACGCGAC CCAACTCGAA GAAGCCAAAG CCAAGCTGAG CAAGATTAAA
ACTGAGCTCA GTGAGCTCAA CCTCGCCGCA GCGGGCAGTG CCGATGAGGA ATTACAAACT
GGCCTTAGCC AATTCATTCA AGACTTAGAC ACTAAATACC GCGCCGCAGG CAAACTCGCT
GGCAACCCAA GACAACTGCT GGCCCACGCC GAATCTGAAA TGCTCGACTA TAACCGCAGA
CTCGGCAGTT ACGCCGACAA AGGCTTAGCG GTTAATACCA CAGTGGCCGA ACAATATCTG
CAATTAAGCC GTGACTTACC CAGCATTGTT TATCAATTAT CGCAGCTTAC CGACGGCTAT
CTCATCGATA AAAATCAGCA ACTTAAAAAT ATTCTCGACA GCACCAGCAA GGAGCTGAAC
CAGTGGCGTG ACCGACTGAA CGCACTGCCG TTAATCGGCG TGTACGAGCA GCAGGAAGCC
GATGAATTTG CCCTCGGCGC GAGTGAACCA GAACAGATTG AAGTGGGCGA AAATGATCGC
AGCGAGCTGT TAAGCCTTGC CAATCGATAC AATAAAGAAG TCGCCAACAC CCACCAACTG
CTGCAAGCCA ATCAGGAGAT GCAAGAGCAG TTAATTCAAG CCATTAGCAG AGTTGAACAG
CAGCTCATCG CCCTCGGTGA GGCGCAGGCC GCCAAAAACC AACAGCTCAA ATATGAGTTA
CAAGTCATTC TTTATGCGAT GGTTTCGATT ATGGCGCTGT TTGCTATCGG CTATTTAATC
CTGCAGCAGA ATCGTGTGGT TAAACCCCTT AAACGCCTCA ATCAAGCCTT TATGCAATTA
AGCGAGTCCA ACAGTCGTGA ACGCTTAGAC ATCAATCGCC GCTGCGAAAC CGGCCAAATT
GCAGGCCATT TCAACCAATT ACTGCACAGA TTCGAGCAAG AAGACGAACT CCAGCGCCAA
CAAATGACTA AGGTTTCTCA ATCCTTAAGT CAGTTGGTCG CGCGCATTAC TCAACTGTCG
CAACACACCG AACACACTCA GACCATAGTT GCCGACACTC AGTCGCAAAC CGAGCATATC
CGCAGCCTCG CCAATGAGGT CAGCCACACC TCGGCCCTTG TTGAACAGAG TGCGGCCGAA
ACCATGCGCC AAATGCAGTC GAGCCAAACC GAGGCAGAAG CAGTGCTGAG TGCCACAGAA
CAAACTCAAA CGGCGGTTGG CCTTTGCCAT GCCTCGCTCG AAAGCCTGAA TAACTCAGTG
GCAGATGTCG CTAAAATCAT TGATGTAATT GGCAATATTG CCGAGCAAAC CAATCTGTTG
GCGCTTAATG CCGCTATCGA AGCCGCCCGA GCGGGCGAGC AAGGTCGCGG CTTTGCCGTG
GTCGCCGATG AGGTTCGAAG CCTGAGTCAA CGCACTCAAG TGTCGTTAAA TGAAATCGTG
AAAATCCTGC ATCAACTCAC CCAATCTAAC CTCGCACTCG GCGAGAGTGT CGATGGCATT
GCCCAAGCGA CCGATAGCCA AAAACAGCGG GCACAGAGCC TATGGCATGT GGCGCAAACC
GTGCAAAATC AAGCGAGTGA AATGGCCAAT ACCGCCAAAC AAGGTTCGCT TAACGCCAAG
GAACAGGTCG ATTACCTCGA TGAATTTGTC CGCAGCATGG ATAACTTAAA AGACCAAGCG
CAAACCAGTT CGCAGCAGAG CGAAGTGATT GCCCAAGAAG TACAGCAAAG CGTGGAAGAT
ATCGAGACTA GCCTAGGCAT AGCCGATACC AACACAGTAT CAGCCCGAGC GGCTTAA
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| Protein sequence | MKISTLSLSA SALLLLLAGL LAAVVLWSSD QRQQIEQQTQ VLQGLQQDFL VGVRRDLDGY
LASGNATQLE EAKAKLSKIK TELSELNLAA AGSADEELQT GLSQFIQDLD TKYRAAGKLA
GNPRQLLAHA ESEMLDYNRR LGSYADKGLA VNTTVAEQYL QLSRDLPSIV YQLSQLTDGY
LIDKNQQLKN ILDSTSKELN QWRDRLNALP LIGVYEQQEA DEFALGASEP EQIEVGENDR
SELLSLANRY NKEVANTHQL LQANQEMQEQ LIQAISRVEQ QLIALGEAQA AKNQQLKYEL
QVILYAMVSI MALFAIGYLI LQQNRVVKPL KRLNQAFMQL SESNSRERLD INRRCETGQI
AGHFNQLLHR FEQEDELQRQ QMTKVSQSLS QLVARITQLS QHTEHTQTIV ADTQSQTEHI
RSLANEVSHT SALVEQSAAE TMRQMQSSQT EAEAVLSATE QTQTAVGLCH ASLESLNNSV
ADVAKIIDVI GNIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLSQ RTQVSLNEIV
KILHQLTQSN LALGESVDGI AQATDSQKQR AQSLWHVAQT VQNQASEMAN TAKQGSLNAK
EQVDYLDEFV RSMDNLKDQA QTSSQQSEVI AQEVQQSVED IETSLGIADT NTVSARAA
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