More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0103 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0103  methyl-accepting chemotaxis protein  100 
 
 
521 aa  1054    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
702 aa  146  8.000000000000001e-34  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  29.37 
 
 
712 aa  142  9.999999999999999e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  36.4 
 
 
545 aa  142  1.9999999999999998e-32  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
497 aa  141  3e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  29.63 
 
 
554 aa  141  3e-32  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.1 
 
 
712 aa  141  3e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  31.94 
 
 
738 aa  140  4.999999999999999e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  29.9 
 
 
626 aa  139  1e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  29.71 
 
 
541 aa  139  1e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  30.21 
 
 
493 aa  139  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  29.34 
 
 
716 aa  137  4e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  29 
 
 
632 aa  137  4e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  31.79 
 
 
639 aa  137  5e-31  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  27.33 
 
 
495 aa  137  7.000000000000001e-31  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  31.06 
 
 
425 aa  136  8e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  33.59 
 
 
545 aa  136  9e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  29.74 
 
 
631 aa  136  9e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
411 aa  136  9e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  31.19 
 
 
543 aa  135  9.999999999999999e-31  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  32.34 
 
 
578 aa  135  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003151  methyl-accepting chemotaxis protein  27.79 
 
 
541 aa  135  1.9999999999999998e-30  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00103096  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  34.18 
 
 
497 aa  135  1.9999999999999998e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  33.33 
 
 
627 aa  135  1.9999999999999998e-30  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  34.77 
 
 
713 aa  135  1.9999999999999998e-30  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  28.75 
 
 
578 aa  134  3e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
638 aa  134  3e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  31.54 
 
 
713 aa  134  3.9999999999999996e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  27.11 
 
 
495 aa  134  3.9999999999999996e-30  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  31.34 
 
 
539 aa  134  5e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  35.37 
 
 
564 aa  134  5e-30  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  29.44 
 
 
632 aa  133  6e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  30.7 
 
 
630 aa  134  6e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  27.11 
 
 
495 aa  133  6.999999999999999e-30  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  30.05 
 
 
706 aa  133  7.999999999999999e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
687 aa  133  7.999999999999999e-30  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
492 aa  132  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
492 aa  132  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  31.28 
 
 
558 aa  133  1.0000000000000001e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  29.97 
 
 
626 aa  132  1.0000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  31.34 
 
 
542 aa  132  1.0000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  29.32 
 
 
626 aa  132  1.0000000000000001e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
640 aa  132  1.0000000000000001e-29  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  30.77 
 
 
559 aa  132  2.0000000000000002e-29  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  32.99 
 
 
546 aa  131  2.0000000000000002e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009654  Mmwyl1_4057  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
537 aa  131  2.0000000000000002e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  31.55 
 
 
695 aa  132  2.0000000000000002e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  32.15 
 
 
570 aa  131  3e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  32.64 
 
 
627 aa  131  3e-29  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008228  Patl_3424  methyl-accepting chemotaxis sensory transducer  28.53 
 
 
674 aa  131  3e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.560716  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
636 aa  131  3e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  28.84 
 
 
492 aa  130  4.0000000000000003e-29  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  31.61 
 
 
634 aa  130  4.0000000000000003e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.07 
 
 
630 aa  130  4.0000000000000003e-29  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007575  Suden_1178  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
530 aa  131  4.0000000000000003e-29  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  27.04 
 
 
643 aa  130  6e-29  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_013512  Sdel_1434  chemotaxis sensory transducer  33.33 
 
 
530 aa  130  6e-29  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
634 aa  130  7.000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4154  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
642 aa  130  7.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
541 aa  130  8.000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  33.66 
 
 
624 aa  130  8.000000000000001e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  34.75 
 
 
557 aa  130  8.000000000000001e-29  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  30.75 
 
 
492 aa  129  9.000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  29.91 
 
 
528 aa  129  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  31.44 
 
 
624 aa  129  1.0000000000000001e-28  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  29.36 
 
 
629 aa  129  1.0000000000000001e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
625 aa  129  1.0000000000000001e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  30.26 
 
 
770 aa  129  1.0000000000000001e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.99 
 
 
646 aa  129  1.0000000000000001e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  27.55 
 
 
629 aa  129  1.0000000000000001e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  27.88 
 
 
580 aa  129  1.0000000000000001e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  29.64 
 
 
639 aa  129  1.0000000000000001e-28  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  32.66 
 
 
556 aa  129  2.0000000000000002e-28  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
547 aa  129  2.0000000000000002e-28  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.95 
 
 
628 aa  128  2.0000000000000002e-28  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
653 aa  129  2.0000000000000002e-28  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
624 aa  128  2.0000000000000002e-28  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  28.37 
 
 
629 aa  128  2.0000000000000002e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
714 aa  128  3e-28  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  32.32 
 
 
714 aa  128  3e-28  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.7 
 
 
633 aa  128  3e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007005  Psyr_2059  histidine kinase, HAMP region: chemotaxis sensory transducer  30.25 
 
 
491 aa  128  3e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.116428  normal  0.539616 
 
 
-
 
NC_007492  Pfl01_2554  chemotaxis sensory transducer  30.95 
 
 
663 aa  127  3e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.486048 
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
653 aa  127  3e-28  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  35.52 
 
 
538 aa  127  3e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  30.29 
 
 
697 aa  128  3e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
544 aa  127  4.0000000000000003e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  29.61 
 
 
648 aa  127  4.0000000000000003e-28  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  28.48 
 
 
495 aa  127  5e-28  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
638 aa  127  5e-28  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
638 aa  127  5e-28  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  32.27 
 
 
715 aa  127  6e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  29.36 
 
 
541 aa  127  6e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.77 
 
 
624 aa  127  7e-28  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
555 aa  126  8.000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
630 aa  126  8.000000000000001e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
638 aa  126  8.000000000000001e-28  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
653 aa  126  8.000000000000001e-28  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  27.73 
 
 
628 aa  126  9e-28  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  26.2 
 
 
495 aa  126  9e-28  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
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