More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_3785 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_3985  methyl-accepting chemotaxis sensory transducer  96.78 
 
 
653 aa  1176    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0160  methyl-accepting chemotaxis sensory transducer  79.33 
 
 
653 aa  985    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3785  methyl-accepting chemotaxis sensory transducer  100 
 
 
653 aa  1302    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3858  methyl-accepting chemotaxis sensory transducer  96.63 
 
 
653 aa  1199    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
654 aa  456  1e-127  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  47.76 
 
 
637 aa  275  2.0000000000000002e-72  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
636 aa  259  1e-67  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
558 aa  252  1e-65  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
638 aa  253  1e-65  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
638 aa  248  3e-64  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
638 aa  248  4e-64  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  42.9 
 
 
639 aa  247  6e-64  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
674 aa  245  1.9999999999999999e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  40.93 
 
 
560 aa  244  3e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
637 aa  243  7.999999999999999e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
638 aa  243  9e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
541 aa  241  2e-62  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  40.44 
 
 
619 aa  241  2.9999999999999997e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
438 aa  241  4e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  42.94 
 
 
640 aa  240  5.999999999999999e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
634 aa  239  1e-61  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  40.44 
 
 
548 aa  238  2e-61  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
640 aa  238  3e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  32.93 
 
 
638 aa  237  4e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
564 aa  237  4e-61  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  39.94 
 
 
642 aa  236  7e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
634 aa  236  8e-61  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
641 aa  236  1.0000000000000001e-60  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
554 aa  236  1.0000000000000001e-60  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
638 aa  236  1.0000000000000001e-60  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
638 aa  236  1.0000000000000001e-60  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
638 aa  236  1.0000000000000001e-60  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  42.61 
 
 
642 aa  235  2.0000000000000002e-60  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
638 aa  235  2.0000000000000002e-60  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.89 
 
 
559 aa  234  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  34.62 
 
 
552 aa  233  6e-60  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_010506  Swoo_3605  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
666 aa  233  8.000000000000001e-60  Shewanella woodyi ATCC 51908  Bacteria  normal  0.644417  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  39.61 
 
 
633 aa  233  1e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.39 
 
 
642 aa  233  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
671 aa  232  2e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  30.99 
 
 
649 aa  232  2e-59  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  39.84 
 
 
541 aa  231  2e-59  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
638 aa  231  4e-59  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
638 aa  230  5e-59  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
638 aa  230  6e-59  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009052  Sbal_0934  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
667 aa  230  7e-59  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  42.3 
 
 
561 aa  230  8e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  39.66 
 
 
773 aa  229  1e-58  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011663  Sbal223_3356  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
667 aa  229  2e-58  Shewanella baltica OS223  Bacteria  normal  0.386472  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
638 aa  229  2e-58  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
552 aa  228  2e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009997  Sbal195_3553  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
667 aa  228  2e-58  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  41.99 
 
 
561 aa  228  2e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_009665  Shew185_3428  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
667 aa  228  2e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  40.16 
 
 
554 aa  228  3e-58  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  42.38 
 
 
636 aa  228  3e-58  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
545 aa  227  6e-58  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.1 
 
 
712 aa  227  6e-58  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
540 aa  226  7e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
674 aa  226  9e-58  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
638 aa  226  1e-57  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  41 
 
 
676 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0902  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
673 aa  226  1e-57  Shewanella sp. MR-4  Bacteria  normal  normal  0.73728 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  40.51 
 
 
558 aa  225  2e-57  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.82 
 
 
712 aa  225  2e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  34.21 
 
 
638 aa  225  2e-57  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_008322  Shewmr7_3118  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
673 aa  225  2e-57  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
549 aa  224  3e-57  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41 
 
 
681 aa  224  3e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
554 aa  224  3e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.93 
 
 
634 aa  224  4e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
638 aa  224  4e-57  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009438  Sputcn32_0950  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
667 aa  224  4.9999999999999996e-57  Shewanella putrefaciens CN-32  Bacteria  normal  0.231949  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.48 
 
 
716 aa  223  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  41.48 
 
 
620 aa  223  9.999999999999999e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  30.19 
 
 
629 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  43.79 
 
 
647 aa  222  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
640 aa  223  9.999999999999999e-57  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  41.47 
 
 
560 aa  222  9.999999999999999e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
568 aa  223  9.999999999999999e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3212  methyl-accepting chemotaxis sensory transducer  40 
 
 
673 aa  222  1.9999999999999999e-56  Shewanella sp. ANA-3  Bacteria  normal  0.990285  normal  0.659639 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  40.23 
 
 
545 aa  221  1.9999999999999999e-56  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
650 aa  221  3e-56  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
636 aa  221  3e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
667 aa  221  3e-56  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
543 aa  221  3.9999999999999997e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  41.6 
 
 
672 aa  221  3.9999999999999997e-56  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  40.17 
 
 
568 aa  221  5e-56  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
645 aa  220  5e-56  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
667 aa  220  5e-56  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  40.9 
 
 
667 aa  220  6e-56  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  41 
 
 
544 aa  220  7.999999999999999e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
620 aa  219  8.999999999999998e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  38.53 
 
 
554 aa  219  1e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  37.97 
 
 
495 aa  219  1e-55  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  37.77 
 
 
543 aa  219  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
554 aa  218  2e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
620 aa  218  2e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.32 
 
 
630 aa  218  2.9999999999999998e-55  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  43.81 
 
 
647 aa  218  4e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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