| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0942 |
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| Symbol | |
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| ID | 4603194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1139226 |
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| End bp | 1140713 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780277 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_926819 |
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| Protein GI | 119774079 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000202207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA ATCTGGCACT TAAGGTGCAG ATTGGCCTGG CATTGGCGCT GTCAGGCTTG
ATGGTGTTGC TGTTTGGTGC GACCTTTTTG TTTGAAAAGC AAAAGCTTGA ACAGGCCTTT
GCCGAATATG AAAAAGATAC CCTCGCCAGT CTGGCAGTGA CCATGGCTCA GCCAGTGTTT
ACCTATGATT TTGAACAGAT AGAAGCAATT TTGTCGGTGA CCCTGGAGCA GGAGCAAATC
GCCGCGCTCA AGGTGTTCGA TCATCGCGGT AAGCCCATGG CCAGTGTTGG CAGCAATACC
GGCGAAGATG CGGGTCTTGA GCAAAAGAGC ATTAGCTTTA GCGACAACGG CAAACCCACC
GGCAAGATGG AGGTGACCTT TACCCGGGCG CCCATTGAGG CGAGACTCAG CTCCTTGTTG
CTTGGGCTAC TGGCCCAGGG CGCACTGATT TTGTTGCTGA GTATGGTGGT GATCGTCATT
ATTCTCAAAA AGTTGGTGAT TACTCCCCTT GCTCACGTCG TTTCGGCCAT GGAGGATGTA
GCCAGCGGTG ATGGCGACCT GACCCGTCGG CTGCCGGTGG AAAGTCAGGA TGAGATTGGC
CGTCTGGCAT CGGCTTTTAA TGCCTTTATT GAACAAATTC ATGCCACCGT AACCAAGGTG
CAGGAAACCG CTGCCCAGCT GATTGAAGGG GCGGGCACCC TGGGAAGCCT CAGCGGCGCC
AATAATCTGA GGGTGCAGGA GCAGCGTCAG GAGACCGAAG CGGCGGTGAC TGCGGTCAGC
CAGCTGTCGG CCAGTGCTGC CGAGGTGGCT GGTAATGCCC TGCGTACCTC CGAAGCGGCG
GCCGAGGCCG ATGCCCAGGT GGATGAGAGT CAGCGCCGCT TCGACCAGAG TCTGGGGCTG
ACCCGCCAGC TGGTGGATGA GCTCAGCCGC TGCGCCATAT CCGTACAGCA GCTGCAGCAG
GAAACTCAAA AGATTGATGA AGTGGTAGTG GTGATTAACA GCATTGCCGA GCAGACCAAT
CTGCTGGCAC TGAATGCCGC CATTGAGGCC GCCCGGGCGG GAGAGCAGGG CAGGGGCTTT
GCTGTGGTGG CCGATGAAGT GCGCACCCTG GCAAGCCGCA CCCAGCAAGC CACCGGCGAA
ATTCAAAAGA TGATCCAGCA GGTGCAAACC CGGGTGAATG ATACCGTTAC CGTGATGGGG
GCCAGTCAGC AGCTGTCGGA TAAGTCGTTG TCGCAGGCCG AGGAAATCAA ATCCATGCTT
GCCAGCGTTA CCCGCCTGGT TTCCAATATC AACGCCATGA ATACCGAAGT GGCCCATGCT
GCATCAGAGC AAACCAGCGT CACTGAAAAT ATTTCCAGAA GTTTGAACGA TCTCGCCGGC
ATCTCAGGTT CGGCCTCAGC AGACAGTGCC TCGTTGGCGC AGTCCGGTGA GCGCCTGTTC
CAACAGGGGG AAAGATTGCG GGCACTTGTA AACTCATTCA GGTTGTAG
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| Protein sequence | MNNNLALKVQ IGLALALSGL MVLLFGATFL FEKQKLEQAF AEYEKDTLAS LAVTMAQPVF
TYDFEQIEAI LSVTLEQEQI AALKVFDHRG KPMASVGSNT GEDAGLEQKS ISFSDNGKPT
GKMEVTFTRA PIEARLSSLL LGLLAQGALI LLLSMVVIVI ILKKLVITPL AHVVSAMEDV
ASGDGDLTRR LPVESQDEIG RLASAFNAFI EQIHATVTKV QETAAQLIEG AGTLGSLSGA
NNLRVQEQRQ ETEAAVTAVS QLSASAAEVA GNALRTSEAA AEADAQVDES QRRFDQSLGL
TRQLVDELSR CAISVQQLQQ ETQKIDEVVV VINSIAEQTN LLALNAAIEA ARAGEQGRGF
AVVADEVRTL ASRTQQATGE IQKMIQQVQT RVNDTVTVMG ASQQLSDKSL SQAEEIKSML
ASVTRLVSNI NAMNTEVAHA ASEQTSVTEN ISRSLNDLAG ISGSASADSA SLAQSGERLF
QQGERLRALV NSFRL
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