More than 300 homologs were found in PanDaTox collection
for query gene MADE_01222 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  100 
 
 
580 aa  1180    Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  31.29 
 
 
667 aa  225  1e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  31.89 
 
 
658 aa  225  2e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  32.53 
 
 
658 aa  221  3e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
632 aa  220  6e-56  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_009831  Ssed_3114  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
667 aa  219  1e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
716 aa  219  1e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  32.52 
 
 
658 aa  218  2e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  37.93 
 
 
712 aa  217  4e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
702 aa  216  9.999999999999999e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_009654  Mmwyl1_1385  methyl-accepting chemotaxis sensory transducer  29.46 
 
 
683 aa  216  9.999999999999999e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.64 
 
 
712 aa  215  1.9999999999999998e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
627 aa  211  2e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  29.55 
 
 
667 aa  212  2e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.73 
 
 
637 aa  211  3e-53  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  32.34 
 
 
623 aa  210  6e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  29.54 
 
 
667 aa  210  6e-53  Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.05 
 
 
713 aa  207  3e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
636 aa  206  7e-52  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  37.87 
 
 
545 aa  205  2e-51  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_008321  Shewmr4_1243  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
667 aa  205  2e-51  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  41 
 
 
714 aa  203  7e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008322  Shewmr7_1313  methyl-accepting chemotaxis sensory transducer  29.06 
 
 
667 aa  202  9.999999999999999e-51  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00146838  normal 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  38.1 
 
 
545 aa  202  1.9999999999999998e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  37.15 
 
 
497 aa  201  1.9999999999999998e-50  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
674 aa  201  3e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_008577  Shewana3_1293  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
667 aa  201  3e-50  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  31.65 
 
 
623 aa  200  6e-50  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  38.3 
 
 
738 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008700  Sama_2345  putative methyl-accepting chemotaxis sensory transducer  30.59 
 
 
666 aa  197  4.0000000000000005e-49  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.60686 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  37.1 
 
 
548 aa  196  7e-49  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
667 aa  196  7e-49  Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  28.5 
 
 
656 aa  196  8.000000000000001e-49  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_009092  Shew_1310  methyl-accepting chemotaxis sensory transducer  29.4 
 
 
667 aa  196  1e-48  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  28.78 
 
 
667 aa  195  2e-48  Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_011663  Sbal223_1387  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
667 aa  195  2e-48  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
667 aa  194  3e-48  Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_009052  Sbal_0938  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
548 aa  193  7e-48  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3549  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
548 aa  193  7e-48  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3424  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
548 aa  193  7e-48  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3352  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
573 aa  193  8e-48  Shewanella baltica OS223  Bacteria  normal  0.729863  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
564 aa  193  9e-48  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  29.06 
 
 
667 aa  192  2e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
640 aa  191  2.9999999999999997e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
638 aa  190  5.999999999999999e-47  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
560 aa  190  8e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  35.18 
 
 
716 aa  189  9e-47  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
637 aa  189  9e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  35.57 
 
 
568 aa  189  1e-46  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  37.62 
 
 
559 aa  189  2e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  33.79 
 
 
640 aa  187  4e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  34.84 
 
 
770 aa  187  4e-46  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0596  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
640 aa  187  6e-46  Shewanella loihica PV-4  Bacteria  normal  normal  0.270432 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  30.18 
 
 
622 aa  186  7e-46  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
552 aa  186  9e-46  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  38.46 
 
 
560 aa  186  1.0000000000000001e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  40.75 
 
 
714 aa  186  1.0000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
554 aa  186  1.0000000000000001e-45  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
541 aa  186  1.0000000000000001e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  28.89 
 
 
662 aa  186  1.0000000000000001e-45  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  28.76 
 
 
661 aa  185  2.0000000000000003e-45  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
495 aa  185  2.0000000000000003e-45  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  27.19 
 
 
678 aa  185  2.0000000000000003e-45  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  37.99 
 
 
546 aa  184  3e-45  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
544 aa  184  3e-45  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  40.75 
 
 
714 aa  184  3e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  35.18 
 
 
495 aa  184  4.0000000000000006e-45  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  37.58 
 
 
561 aa  184  5.0000000000000004e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
544 aa  183  6e-45  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  30.6 
 
 
638 aa  183  6e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
543 aa  183  8.000000000000001e-45  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
554 aa  183  8.000000000000001e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  33.7 
 
 
714 aa  182  1e-44  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
714 aa  183  1e-44  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  29.09 
 
 
662 aa  182  1e-44  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  34.68 
 
 
495 aa  182  1e-44  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
714 aa  182  1e-44  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  37.58 
 
 
561 aa  182  2e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
540 aa  182  2e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  28.54 
 
 
641 aa  181  2.9999999999999997e-44  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  31.59 
 
 
495 aa  181  2.9999999999999997e-44  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  32.38 
 
 
632 aa  181  2.9999999999999997e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
622 aa  181  4e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  34.7 
 
 
640 aa  181  4e-44  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
688 aa  181  4e-44  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  31.33 
 
 
656 aa  181  4e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
543 aa  181  4e-44  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.24 
 
 
626 aa  181  4e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
573 aa  180  4.999999999999999e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  28.28 
 
 
645 aa  180  5.999999999999999e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
638 aa  180  7e-44  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.08 
 
 
523 aa  180  7e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
543 aa  180  8e-44  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  35.6 
 
 
634 aa  180  8e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
543 aa  179  9e-44  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  34.41 
 
 
629 aa  179  9e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
671 aa  179  9e-44  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
543 aa  179  9e-44  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.51 
 
 
541 aa  179  1e-43  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
541 aa  179  1e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
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