| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3858 |
|---|
| Symbol | |
|---|
| ID | 4254802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4580184 |
|---|
| End bp | 4582145 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638124547 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_739892 |
|---|
| Protein GI | 114049342 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTA TCAATCAGTT AACGCTCACT AAAAAGCTTG CTATCGTTCC TGTGTTTCTC
GTTGCCATGC TTATCACTTT AGGGGTATTA AGCTACTTTG CCCTGACCGA CATTGATAAT
CGGATGCGCA CCGTTACCGA AGATCTTGCC CCAGAAAGCG ATCTCACCAG CAGCCTGCTA
CAGGAAATTT ATCGCCTGCG CCTCACGGTA AAAATCTATG TCAAAACCGG CTCCAGCGAG
ACGGCAGCCG AATTTAGCGC CCAAGATAAT AAAACCCGCG ACTTATTGGC GAAAGCAAAA
GCCCATATAG ATAATCCTGA ACGAACTCAA ATGCTTGAGC AGATCATTGC CCATGAAAAA
GAGTATGTAG ATATTTTTAA TCGCCAAGTC GTGAGTAATC AGCAGCAAAG GGCCAAGCTC
GTCACTGGCA TTCTCGATGT TAAAGGACCT GAAATAGAGA AAATTATCTC CCAGATTATG
CAGGCATCTT TTACCGATGG CGATGTACAG GGCGCCTTCT TTGCAGGTAA AAATCTGCGC
GAACTGCTTC TGGCACGCCT TTATGTCAGC AAGTTTCTCC TCGACAATCA AGCCGACCAA
GCGCAGCGCT TCCAGGAAGA AATCGCCAAT ACTCACGCCA CTATGGATGA ACTCGCCGCG
GCGCTAGACA ACTTGACCTA TCAGTCTCAG GTCAAGCAAG CCGCTGGGCT GTTAACTGAG
TATGAACAAG CGGCCAAAGG GGTATTTGAG ACAATCAACA ATCGCAACCA AGCCATAGTG
CAGCTCGATA ATATTGGCAT CGAAATGGCC AAGATAACCT CAGATCTGCA AGACAATACC
ATGAAATCCC TTTCCGAAGC GGGCGACATC GCCGCACAAG AAGTCAGCCA AAAGATCACC
TTTATCAACA TTATCCTGCT GATCGCGATT CTACTCTCGG CCTTTATTAC TGTAATAGTG
ACCCAAAGCT TACTGCGTAC CATACGTGAA GTGGTGGCGC TGCTGAATGA AATTGCCGAT
GGCGAGGCCG ATCTCACCCA GCGCCTTCCT GAGAATGGCC ATGACGAATT GACCCAACTT
GCCAAAAACT TTAACCGCTT TGTGCTGCGG ATCCAGCAGT TGGTGGCCGA AGTTAAAGAT
ACGACAGTCC AAATGGTTAG CGCCTCAACT CAGCTCAATA ACGTGACCCA CAATGCCACC
CAAGACATGA GTTCCCAACA GAACGAAACC CAACTCGTTG CCTCGGCCAT CACCGAAATG
GCCGCCAGTG CCGTCGAGGT CGCCGCCAGT GCCGACACAG CTAATAAGCT CTCGGAAGAT
GCCAAAGCAC AAGCTCTCCT CGGCCGCGAG ACAGTCACCC GCGCCACCCA TTCGATGAGG
GAACTGGCGA GCAAAGTCGA AGCCTCGGCC ACCACCATAG AACAGTTACG TAATGACAGC
GATAAGATTG GCGCCGTCCT CGATGTGATC CGCGCCATTG CCGAGCAAAC CAATCTGTTG
GCGCTCAACG CGGCCATCGA AGCGGCTCGG GCAGGCGAGC AAGGGCGTGG CTTTGCCGTA
GTTGCCGATG AAGTACGTTC GCTTGCCAGT CGAACGCAAG AATCGACCAA ACAAATCCAG
CAAATCATCC AAACGCTGCA GGATAGATCG GGCTCAGCGG CGACCATGAT GGGACAAAGC
CGAGAAGCCA CCAACAGCAC GGTCGAGCAA GTAACCCAAG TGGAATCGGC CCTCTCGACT
ATCACCGAAA TGGTCATGTC GATCACCCAC TCGGTTTCGC AAATGGCCCA CGCCGCCGAG
CAACAATCAA CCGTAGTAGA AGAAATTAAT ATGTCGATTA ATAGCGTCAA TGACAGCGCC
AGCCGCACTC TGACGGGGGT AAAACAAGCG GCAAGCTCAG CCAATGGTTT ATTGGGTATA
GGTCAGCAAC TGGATGGATT AGTGAGTGAA TTTAAGGTTT AA
|
|---|
| Protein sequence | MFSINQLTLT KKLAIVPVFL VAMLITLGVL SYFALTDIDN RMRTVTEDLA PESDLTSSLL
QEIYRLRLTV KIYVKTGSSE TAAEFSAQDN KTRDLLAKAK AHIDNPERTQ MLEQIIAHEK
EYVDIFNRQV VSNQQQRAKL VTGILDVKGP EIEKIISQIM QASFTDGDVQ GAFFAGKNLR
ELLLARLYVS KFLLDNQADQ AQRFQEEIAN THATMDELAA ALDNLTYQSQ VKQAAGLLTE
YEQAAKGVFE TINNRNQAIV QLDNIGIEMA KITSDLQDNT MKSLSEAGDI AAQEVSQKIT
FINIILLIAI LLSAFITVIV TQSLLRTIRE VVALLNEIAD GEADLTQRLP ENGHDELTQL
AKNFNRFVLR IQQLVAEVKD TTVQMVSAST QLNNVTHNAT QDMSSQQNET QLVASAITEM
AASAVEVAAS ADTANKLSED AKAQALLGRE TVTRATHSMR ELASKVEASA TTIEQLRNDS
DKIGAVLDVI RAIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLAS RTQESTKQIQ
QIIQTLQDRS GSAATMMGQS REATNSTVEQ VTQVESALST ITEMVMSITH SVSQMAHAAE
QQSTVVEEIN MSINSVNDSA SRTLTGVKQA ASSANGLLGI GQQLDGLVSE FKV
|
|---|
| |