Gene Dhaf_0516 details

Gene Information

• Locus tag: Dhaf_0516
• ID: 7257483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 568042
• End bp: 570036
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643560435
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002457019
• Protein GI: 219666584
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0344435
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTGAAAA GTCTGGCTAC AAAATTTGTG TTCTTGATCA GTATTCTTCT CATCATCGTT 
TGTGGAAGCC TTGGGTTTAT CAGCAATCAT TTTTCTTCTC AAGCGGTACT CAAAGAGGTC 
AATCAATCGT TGGAGATAGT TTCCCGGGAG ACGGCGCTGG CATTGAAGAA CGACCTGGAA 
AGACAGCTTG GTTTATTAGA ACTCCTCGCC AACCTGGAGG CGATTAAGGA CCCGGAGGTG 
CCCGCGGAAG AAAAAGTAAG GGTTTTGAAA AGTGAAATCC AACGGGCAGG ATATATAGAT 
TTGGGGATTG CGGACTTAGA GGGAAACTTA ATCAACGGTC AGGGAGTGGC CGGGGTCAAT 
ATCGCCGATC AGGACTACTT CAAGGAAGCC ATAGCCGGCA AAGCCGTAGC CTCCGATCCC 
AAAACAAGCA AGGTTGACGA CTCCGTAATT ACTGCTTATG CGGTCCCCGT CAAACATGGC 
AGCCAAATCA TCGGTGCTTT AATTGCCACC CGTGACGGCT ACGAGTTGTC CAGGTTTACC 
CAGTCTATAG AACTGGGCGG CTCCAGAGCT GTTTTTGTGA TCAACGGTCA GGGTACGGCC 
ATTGCCAATG CGGACCTTGA AAAGGTTAAA ACCATGGACA ATATTTTTAA AAATGCTGAA 
AAAGACCCCG GACTGGCCGA TTTTGCGGCA TTGCAAAAGA AAATGGTCGC CGGAGAAAGC 
GGTGTGGGTT CATATATTTA CGGAGGGATA AAAAAATATA CAGGATACGC TCCTGTGGAG 
GGAACAACCT GGTCATTAGC CGTAACTGCT CCACAGAAGG AAGTTATGGC TGGGGTCGAT 
AATCTGAGGA AAATCCTGAT TATCTGTTCC TTTGCCTTCT TTTTGATCGG GATCGTTGCT 
GCTTATGGAT TCACCCGCAA TATTGTCGGC CCCCTCAATC AGTTGGTGGA TAAAATTCAG 
GAAGTGGCCA AAGGAAATCT GGCCGTAGAA GATGTGGAAG TCAAGAGCAG GGATGAAGTG 
GGCCTTGTAG GGGACGCCCT GAACACCATG CTGGGGAGTC TGCGGGACTT GGTAAACACT 
GCCGGCGCTC TGGCCGAACA GGTGGCCGCC TCCTCCCAGG AACTGACCAC CGGTGCGGAG 
CAGCAGGCCA AAGCGGCCAG TGAAGTGGCC AGCACCATAA CCAATTTAGC CTTGGGGGCG 
GAAAATCAGG AAAAAAGCGT GGATGAAATA ACCGCCTCCG TCGAAGAAAT TTCAGTCACC 
ATAGAACAAT TGGCGGTCAA CAGCAACAGA GTTGCCCAAC AAACAAAAGA AGCGGCGACG 
GCTTCTTCTC AAGGACAGAA ATCGGCGCTG CGGGCTGTGG AACAAATGAA GAATATAGGC 
GAAGTCTCTG TGAAGGTTCA GAGCGCCGTG GGCCGCTTGG CTGTCAGTTC CCAGGAAATC 
AGTGAAATCA ATGATGTGAT TTCGGGAATA GCGGAACAAA CCAATCTGCT GGCTTTGAAT 
GCGGCTATTG AAGCCGCCAG AGCGGGGGAG CAGGGCCGGG GATTTGCCGT AGTAGCCGAA 
GAAGTGCGCA AACTGGCCGA ACAGTCTCAG GCCGCAGCTA AGCAGATTGC CCAGCGTATC 
ACCCTGAATC AGTCCCATAT TACGGATGCG GTGACGGCGA TTGAATTAAG CAGTGAAGAT 
ATTCAAGCGG GCATAGAAGT GGTCAATACC GCCGGGGGGG CTTTTGAAGA TATCGATACC 
CTTATGAGCA TGGTATCAAG CCAAGTGGCG GAGATTTCAA CCGCCATCCA GCAGCTTGCC 
CAAGGGAGCC AGAGCATCGT TGAAGCCGTC CGCAGTCTGG AGAGCATTAC CAAAGAGAAT 
ATGGACACCT CCCAAACAGT ATCTGCCGCC ACCGAAGAGC AGACAGCATC CATCGAGGAA 
ATCGCCGCTT CCAGTCAGAA CCTGGCTGCA ATGGCGGAAA GTCTGCAGGT AAGTCTCAGC 
AAATTTACGG TTTAA 

 

Protein sequence

MLKSLATKFV FLISILLIIV CGSLGFISNH FSSQAVLKEV NQSLEIVSRE TALALKNDLE 
RQLGLLELLA NLEAIKDPEV PAEEKVRVLK SEIQRAGYID LGIADLEGNL INGQGVAGVN 
IADQDYFKEA IAGKAVASDP KTSKVDDSVI TAYAVPVKHG SQIIGALIAT RDGYELSRFT 
QSIELGGSRA VFVINGQGTA IANADLEKVK TMDNIFKNAE KDPGLADFAA LQKKMVAGES 
GVGSYIYGGI KKYTGYAPVE GTTWSLAVTA PQKEVMAGVD NLRKILIICS FAFFLIGIVA 
AYGFTRNIVG PLNQLVDKIQ EVAKGNLAVE DVEVKSRDEV GLVGDALNTM LGSLRDLVNT 
AGALAEQVAA SSQELTTGAE QQAKAASEVA STITNLALGA ENQEKSVDEI TASVEEISVT 
IEQLAVNSNR VAQQTKEAAT ASSQGQKSAL RAVEQMKNIG EVSVKVQSAV GRLAVSSQEI 
SEINDVISGI AEQTNLLALN AAIEAARAGE QGRGFAVVAE EVRKLAEQSQ AAAKQIAQRI 
TLNQSHITDA VTAIELSSED IQAGIEVVNT AGGAFEDIDT LMSMVSSQVA EISTAIQQLA 
QGSQSIVEAV RSLESITKEN MDTSQTVSAA TEEQTASIEE IAASSQNLAA MAESLQVSLS 
KFTV