More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0259 on replicon NC_009456
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0259  hypothetical protein  100 
 
 
515 aa  1041    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
497 aa  189  9e-47  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal 
 
 
-
 
NC_008321  Shewmr4_2937  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
495 aa  186  7e-46  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000865197  normal  0.384283 
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  33.41 
 
 
495 aa  186  7e-46  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_008577  Shewana3_3116  methyl-accepting chemotaxis sensory transducer  32.19 
 
 
495 aa  182  1e-44  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00299178  normal 
 
 
-
 
NC_009665  Shew185_1142  methyl-accepting chemotaxis sensory transducer  30.95 
 
 
495 aa  181  2.9999999999999997e-44  Shewanella baltica OS185  Bacteria  normal  0.0413666  n/a   
 
 
-
 
NC_009997  Sbal195_1176  methyl-accepting chemotaxis sensory transducer  31.86 
 
 
495 aa  180  4.999999999999999e-44  Shewanella baltica OS195  Bacteria  hitchhiker  0.00652986  normal 
 
 
-
 
NC_009052  Sbal_1082  methyl-accepting chemotaxis sensory transducer  31.86 
 
 
495 aa  179  9e-44  Shewanella baltica OS155  Bacteria  hitchhiker  0.000101058  n/a   
 
 
-
 
NC_011663  Sbal223_3213  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
495 aa  179  1e-43  Shewanella baltica OS223  Bacteria  normal  0.023485  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
541 aa  171  4e-41  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  31.92 
 
 
642 aa  169  1e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  28.24 
 
 
497 aa  167  5e-40  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  35.52 
 
 
674 aa  166  1.0000000000000001e-39  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  27.1 
 
 
499 aa  165  2.0000000000000002e-39  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  34.09 
 
 
558 aa  164  3e-39  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  33.06 
 
 
706 aa  164  3e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
540 aa  163  6e-39  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  30.99 
 
 
578 aa  163  7e-39  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  31.14 
 
 
578 aa  163  7e-39  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  31.61 
 
 
643 aa  162  9e-39  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  30.9 
 
 
639 aa  161  2e-38  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  31.64 
 
 
642 aa  162  2e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
626 aa  160  4e-38  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  28.33 
 
 
559 aa  160  5e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  30.39 
 
 
548 aa  160  5e-38  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
647 aa  160  5e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  34.57 
 
 
640 aa  160  6e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.95 
 
 
623 aa  160  6e-38  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  29.98 
 
 
495 aa  160  7e-38  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
622 aa  158  2e-37  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  30.86 
 
 
561 aa  158  2e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  29.1 
 
 
648 aa  159  2e-37  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  34.66 
 
 
663 aa  159  2e-37  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
543 aa  159  2e-37  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29800  putative chemotaxis transducer  30.86 
 
 
561 aa  158  2e-37  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.00431462  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  33.43 
 
 
629 aa  158  3e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.65 
 
 
646 aa  157  6e-37  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
640 aa  156  7e-37  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  33.97 
 
 
715 aa  156  8e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  33.43 
 
 
716 aa  155  2e-36  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
687 aa  155  2e-36  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
533 aa  155  2e-36  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  32.34 
 
 
628 aa  154  2.9999999999999998e-36  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
541 aa  154  2.9999999999999998e-36  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  29.04 
 
 
646 aa  154  4e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
638 aa  154  4e-36  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  28.24 
 
 
558 aa  154  4e-36  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
627 aa  154  5e-36  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
638 aa  153  5.9999999999999996e-36  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  34.78 
 
 
628 aa  153  5.9999999999999996e-36  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
705 aa  153  7e-36  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  32.88 
 
 
627 aa  152  1e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1999  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
405 aa  152  1e-35  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
638 aa  152  2e-35  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  32.76 
 
 
690 aa  152  2e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_009457  VC0395_A0365  accessory colonization factor AcfB  32.14 
 
 
626 aa  152  2e-35  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
632 aa  150  4e-35  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
560 aa  150  4e-35  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
674 aa  150  5e-35  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  30.11 
 
 
626 aa  150  5e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
716 aa  150  5e-35  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
688 aa  150  6e-35  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
714 aa  149  9e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  28.27 
 
 
638 aa  149  1.0000000000000001e-34  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  30.35 
 
 
536 aa  149  1.0000000000000001e-34  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  31.95 
 
 
553 aa  149  1.0000000000000001e-34  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  29.62 
 
 
648 aa  149  1.0000000000000001e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
554 aa  149  1.0000000000000001e-34  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  29.55 
 
 
558 aa  149  1.0000000000000001e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  29.62 
 
 
554 aa  149  1.0000000000000001e-34  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
554 aa  149  1.0000000000000001e-34  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_003910  CPS_4711  methyl-accepting chemotaxis protein  28.19 
 
 
633 aa  148  2.0000000000000003e-34  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  34.09 
 
 
633 aa  149  2.0000000000000003e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  33.53 
 
 
640 aa  149  2.0000000000000003e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  33.53 
 
 
640 aa  148  2.0000000000000003e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  33.22 
 
 
628 aa  148  2.0000000000000003e-34  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  29.91 
 
 
553 aa  148  2.0000000000000003e-34  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  28.97 
 
 
568 aa  148  3e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.48 
 
 
639 aa  147  3e-34  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  31.27 
 
 
636 aa  148  3e-34  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.89 
 
 
623 aa  148  3e-34  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
554 aa  147  4.0000000000000006e-34  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  34.89 
 
 
619 aa  147  4.0000000000000006e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
564 aa  147  4.0000000000000006e-34  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  31.72 
 
 
738 aa  147  4.0000000000000006e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  28.83 
 
 
712 aa  147  4.0000000000000006e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  28.27 
 
 
630 aa  147  4.0000000000000006e-34  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
630 aa  147  4.0000000000000006e-34  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  30.16 
 
 
641 aa  147  5e-34  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  31.69 
 
 
630 aa  147  5e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  32.21 
 
 
630 aa  146  7.0000000000000006e-34  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
622 aa  146  8.000000000000001e-34  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  32.55 
 
 
701 aa  146  8.000000000000001e-34  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
674 aa  146  8.000000000000001e-34  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  29.4 
 
 
672 aa  146  8.000000000000001e-34  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_011313  VSAL_II0771  methyl-accepting chemotaxis protein  33.33 
 
 
661 aa  146  9e-34  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  31.71 
 
 
714 aa  145  1e-33  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  31.81 
 
 
639 aa  145  1e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
706 aa  146  1e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2562  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
671 aa  145  1e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.0046581 
 
 
-
 
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