Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0079 |
Symbol | |
ID | 7257028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 80344 |
End bp | 82110 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643559982 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_002456584 |
Protein GI | 219666149 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.031352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAAGTA TCAGAGCGCG TCTAATTTTA GCATTTATTT TTACATCCAT GCTGATGAGC ATTATTGTGG GAGGGTATAA TATCTACCGG CAAATCGACA TTTTGAAAAA CAATGTCCAG AGCTACCGGG AAACCCTCTT TGCCGAATAT GATCGGGGGA TTAAGACAGA TGTAGAGATT GCCATCAGCG TCATTGACAA GGTATATAAA GAGCAGCAGG CAGGCCTGCT CTCAGAGGAG GAGGCTAAGA CCAAGGCTGC CGACCTGGTT CGGGAGCTTC GCTTTGACGG GGAGAACTAT TTCTGGGTTG ATACCACTGA AGGAATTAAT GTGGTTCTCC TGGGGCGGGA TACCGAAGGG AAGAGCCGGC TTGATGCAGT GGACCCTAAT GGCTATGCCT ATGTACGGGA TGGCTTTATA AAAAATGCGC TTAGTGGCGG AGGCTACTCA GACTATGAAT TTGCTAAACC CAATGAAACG GAGCCCACCC CCAAGAGAGG ATATACCCAG CTCTTTGAGC CCTATGGCTG GGTTATAGGA ACCGGGAACT GGGTGGACGA TATTGAGACA GAGGTCATTG CCCAAGAGCT GATCTATCAA AAACAAATGT CCAAGGATAT TATAAGCATC TCTGTCGCCA TGATTCTTGG TTTAATCATC GTAAGCGCCG TCGGCTTTAA AATCAGCCAG GGTATTACCA GGCAGGTCAA ACAGGTTGCC CAGGGTGCCA ATGAAGTGGC CCAAGGCAAT CTGAGGATTG AGAAAATCCA AGTGGATTCA AGGGATGAGC TGGGTCAGCT GGCTCAGGAT TTTAACCACA TGGCAGAGAA CCTTACCCAA TTGGTCAAAC AGGTTTCCCT GGCTTCGGAA CATATCGCCT CCTCTTCTCA ACAATTGTCC GCAGGAGCCG AACAATCAGC CCAGGCGGCT AATGAAGTAG CCTCTGCGAT CACCGAAGTG GCTCAGGGGA CGGAAAAGCA GATGACCGCA GTGAATGACG TGGCGGCTGT GGTGGAAGAA ATGGCGGCAG GAATGGGTCA AGTGCTGAAC AATACGGAAT ATGTGGTTCG TTCAGCCGAA GGAACAGCCA AAGCCACTGA CAAGGGCCAG CAATCCATCC ATACCACCGT CAAGCAAATG GAGAGTATCC AAAAGGCGGT CAACCATAGT GCTTCCTTAG TGGAGCACCT GGGAGTCCGT TCCCAGGAGA TCGGACAGAT CGTTGAAGCC ATCTCCGGGA TCGCCGATCA AACCAATCTT TTGGCTCTCA ATGCCGCCAT CGAAGCAGCC CGGGCCGGTG AACAGGGAAG AGGATTTGCG GTGGTGGCCG AAGAGGTCCG CAAATTGGCT GAACAATCTC AGATTGCCGC CAAACAAATC GCCGATCTTA TTGGGGAAAT TCAGGAGGAT ACCCATAAGG CCGTAGACTC GATGAAGAAC GGGACACAAG AGGTTGAGAT TGGGTCCAAG GTGGTCCATG AAGCAGGCAG CGCTTTCGAA GAGATTGCCG GCCTTATTCA AGAGGTTACC GGGCAGGTTC GGGGAATCTC TCATGAGATT GAAGAAATTT CTCAGGGCAA TGAACGGATT GTTGCCTCCA TCCATGAAGT CAACCAGATC AGCAAATCCA TTGCCGAACA GACTCTCAAT GTGTCGGCTT CAACGGAGGA GCAATCGGCT TCTGTGGAAG AGATCGCCTC TTCCAGCCAA TTGCTGGCCA AAATGACCGA AGATATGGAG CAGGCACTTC ACAAATTCAA GATATAA
|
Protein sequence | MKSIRARLIL AFIFTSMLMS IIVGGYNIYR QIDILKNNVQ SYRETLFAEY DRGIKTDVEI AISVIDKVYK EQQAGLLSEE EAKTKAADLV RELRFDGENY FWVDTTEGIN VVLLGRDTEG KSRLDAVDPN GYAYVRDGFI KNALSGGGYS DYEFAKPNET EPTPKRGYTQ LFEPYGWVIG TGNWVDDIET EVIAQELIYQ KQMSKDIISI SVAMILGLII VSAVGFKISQ GITRQVKQVA QGANEVAQGN LRIEKIQVDS RDELGQLAQD FNHMAENLTQ LVKQVSLASE HIASSSQQLS AGAEQSAQAA NEVASAITEV AQGTEKQMTA VNDVAAVVEE MAAGMGQVLN NTEYVVRSAE GTAKATDKGQ QSIHTTVKQM ESIQKAVNHS ASLVEHLGVR SQEIGQIVEA ISGIADQTNL LALNAAIEAA RAGEQGRGFA VVAEEVRKLA EQSQIAAKQI ADLIGEIQED THKAVDSMKN GTQEVEIGSK VVHEAGSAFE EIAGLIQEVT GQVRGISHEI EEISQGNERI VASIHEVNQI SKSIAEQTLN VSASTEEQSA SVEEIASSSQ LLAKMTEDME QALHKFKI
|
| |