Gene Dhaf_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0079 
Symbol 
ID7257028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp80344 
End bp82110 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content50% 
IMG OID643559982 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_002456584 
Protein GI219666149 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.031352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGTA TCAGAGCGCG TCTAATTTTA GCATTTATTT TTACATCCAT GCTGATGAGC 
ATTATTGTGG GAGGGTATAA TATCTACCGG CAAATCGACA TTTTGAAAAA CAATGTCCAG
AGCTACCGGG AAACCCTCTT TGCCGAATAT GATCGGGGGA TTAAGACAGA TGTAGAGATT
GCCATCAGCG TCATTGACAA GGTATATAAA GAGCAGCAGG CAGGCCTGCT CTCAGAGGAG
GAGGCTAAGA CCAAGGCTGC CGACCTGGTT CGGGAGCTTC GCTTTGACGG GGAGAACTAT
TTCTGGGTTG ATACCACTGA AGGAATTAAT GTGGTTCTCC TGGGGCGGGA TACCGAAGGG
AAGAGCCGGC TTGATGCAGT GGACCCTAAT GGCTATGCCT ATGTACGGGA TGGCTTTATA
AAAAATGCGC TTAGTGGCGG AGGCTACTCA GACTATGAAT TTGCTAAACC CAATGAAACG
GAGCCCACCC CCAAGAGAGG ATATACCCAG CTCTTTGAGC CCTATGGCTG GGTTATAGGA
ACCGGGAACT GGGTGGACGA TATTGAGACA GAGGTCATTG CCCAAGAGCT GATCTATCAA
AAACAAATGT CCAAGGATAT TATAAGCATC TCTGTCGCCA TGATTCTTGG TTTAATCATC
GTAAGCGCCG TCGGCTTTAA AATCAGCCAG GGTATTACCA GGCAGGTCAA ACAGGTTGCC
CAGGGTGCCA ATGAAGTGGC CCAAGGCAAT CTGAGGATTG AGAAAATCCA AGTGGATTCA
AGGGATGAGC TGGGTCAGCT GGCTCAGGAT TTTAACCACA TGGCAGAGAA CCTTACCCAA
TTGGTCAAAC AGGTTTCCCT GGCTTCGGAA CATATCGCCT CCTCTTCTCA ACAATTGTCC
GCAGGAGCCG AACAATCAGC CCAGGCGGCT AATGAAGTAG CCTCTGCGAT CACCGAAGTG
GCTCAGGGGA CGGAAAAGCA GATGACCGCA GTGAATGACG TGGCGGCTGT GGTGGAAGAA
ATGGCGGCAG GAATGGGTCA AGTGCTGAAC AATACGGAAT ATGTGGTTCG TTCAGCCGAA
GGAACAGCCA AAGCCACTGA CAAGGGCCAG CAATCCATCC ATACCACCGT CAAGCAAATG
GAGAGTATCC AAAAGGCGGT CAACCATAGT GCTTCCTTAG TGGAGCACCT GGGAGTCCGT
TCCCAGGAGA TCGGACAGAT CGTTGAAGCC ATCTCCGGGA TCGCCGATCA AACCAATCTT
TTGGCTCTCA ATGCCGCCAT CGAAGCAGCC CGGGCCGGTG AACAGGGAAG AGGATTTGCG
GTGGTGGCCG AAGAGGTCCG CAAATTGGCT GAACAATCTC AGATTGCCGC CAAACAAATC
GCCGATCTTA TTGGGGAAAT TCAGGAGGAT ACCCATAAGG CCGTAGACTC GATGAAGAAC
GGGACACAAG AGGTTGAGAT TGGGTCCAAG GTGGTCCATG AAGCAGGCAG CGCTTTCGAA
GAGATTGCCG GCCTTATTCA AGAGGTTACC GGGCAGGTTC GGGGAATCTC TCATGAGATT
GAAGAAATTT CTCAGGGCAA TGAACGGATT GTTGCCTCCA TCCATGAAGT CAACCAGATC
AGCAAATCCA TTGCCGAACA GACTCTCAAT GTGTCGGCTT CAACGGAGGA GCAATCGGCT
TCTGTGGAAG AGATCGCCTC TTCCAGCCAA TTGCTGGCCA AAATGACCGA AGATATGGAG
CAGGCACTTC ACAAATTCAA GATATAA
 
Protein sequence
MKSIRARLIL AFIFTSMLMS IIVGGYNIYR QIDILKNNVQ SYRETLFAEY DRGIKTDVEI 
AISVIDKVYK EQQAGLLSEE EAKTKAADLV RELRFDGENY FWVDTTEGIN VVLLGRDTEG
KSRLDAVDPN GYAYVRDGFI KNALSGGGYS DYEFAKPNET EPTPKRGYTQ LFEPYGWVIG
TGNWVDDIET EVIAQELIYQ KQMSKDIISI SVAMILGLII VSAVGFKISQ GITRQVKQVA
QGANEVAQGN LRIEKIQVDS RDELGQLAQD FNHMAENLTQ LVKQVSLASE HIASSSQQLS
AGAEQSAQAA NEVASAITEV AQGTEKQMTA VNDVAAVVEE MAAGMGQVLN NTEYVVRSAE
GTAKATDKGQ QSIHTTVKQM ESIQKAVNHS ASLVEHLGVR SQEIGQIVEA ISGIADQTNL
LALNAAIEAA RAGEQGRGFA VVAEEVRKLA EQSQIAAKQI ADLIGEIQED THKAVDSMKN
GTQEVEIGSK VVHEAGSAFE EIAGLIQEVT GQVRGISHEI EEISQGNERI VASIHEVNQI
SKSIAEQTLN VSASTEEQSA SVEEIASSSQ LLAKMTEDME QALHKFKI