| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0117 |
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| Symbol | |
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| ID | 1181725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 138969 |
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| End bp | 140945 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391494 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_789976 |
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| Protein GI | 28867357 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGC CCCGTACCCG AATTGCCTCG CAACTCGGTA TTGCTCTGGC GGTGATCCTG
GCAGTTGTTA TCAGCGGCAG TACGCTGTTC GCTCTGAGGT CTCTGGACGC ATCCAATCTG
GTCATTCGCG AAGAACACAT GTCGAGCGAA GCCCGGTTGC TGGCCGATCA GCTCAGCACC
TTTCACAGCA CACTGCGCGA CAGCACCCAG CGCCTGAGCG GCTTGTTCGA GAAGCGCTTC
GCCGGCGGCC TGACCTTGCA GACCGACAAA CCGGTTGCGG TCGCGGGCAC CCAGACCCCA
GGCCTGTATC TGCGCGATAC TGCCCTGAAC AACGACTTTA CCGAAGTCGA CGAATTTCGT
TCGATGACCG CAGGCGTCGC GACGATATTC GTGCGCAGCG GCGACGACTT CATTCGTATC
AGCACCTCGT TGAGCAAACA GGATGGTACG CGCGCCATCG GCACCGTGCT GGATCGCAAG
GGCACTGCCT ATGAGCGTTT GATGGCCGGT CAGAGCTACG TAGGCAAAGC GGTGTTGTTT
GATCGCTACT ACATGACGCA ATACAGCCCG GTTCGCGACA GCAGCGGCAA GATCATTGCC
GCGCTGTTTG TAGGATTCGA TTACACCGAT GCACAGAAAA CCCAGTTCGA TAACCTGAAG
AGCTTCCGCA TCGGCTCTAC CGGCTCGCTG GCATTGCTCG ATGAGAAGGG CACCTGGCTG
GTTCCGCCTG CGGGCATCAA ATCCCTCGAC GGTGCCGCGA AAGCTGTCGC TGACCTTGCA
AGCAAACCGG GCAAGGCACA GTTCTGGAAT GAAGGCGGCG GCGACTTCTA CAGCGTCGGC
CAACCGTTCG CTGGTGGCCC CTGGACAGTC ATCGCCAGCA TGCCACGCAG TGAAATCAGC
GAAGTGACCT GGAGCGTCGG CACCCAACTG GCCATCGGTA GCCTGCTGGC CATGCTGATC
GCCGTCATCA GCGCTATCTG GCTGCTGCGC AGCAAGCTGC GTCCGTTGTC TGAGCTGGTT
CGCCAGGCCG ATGCACTGGG CGCGGGCGAC CTGAGCGTGC GCCTCAATGT GACCAGCAAC
GACGAGATCG GCCAACTGTC CGGCAGCTTC AACAAGATGA GTGAAGCGCT GTCCTCCATG
GTGTCGCATA TCCGTACCGC CGCGCAGGAA GTCAGCACCC GTGCCCACGC ACTGTCCGGG
TTGTCTGGCG GCGCTTACGA GGGCATGGAA CAACAGTCCG GCGAGATCAC CAGCATGGCC
GGTGCGGTCG AAGAATTCAG CGCCACGTCG ATGAACATCG CCGACAACAT GGGCAACACC
GAGCGCCTGG CGCAGGAAAA CGCCCAGCAG ACCCGCATCG GTCGCACCTC GATGGACGAG
GCGTCTTCAT CGCTGCAACA AATCGCCACC TCGCTGAGCA GCACCGCCAC AGTCATCGAC
ACACTGGGCC AGCGCTCGCA GGAAATTGGC AGCATTGTCG GGGTGATCAC CTCGATTGCC
GACCAGACCA ACCTGCTGGC CCTCAACGCC GCCATCGAGG CCGCGCGTGC CGGTGAACAA
GGCCGCGGCT TTGCCGTGGT GGCTGACGAA GTGCGCAGCC TGGCGTCTCG TACTCGCGAA
GCGACCGACG AGATTTCCGG CATGATCGCC AGTATCCAGC AGGAAACCGG CAACGCGATC
AGCACCATGC AGCAGGGCAA TACGCTGATG CAGGAAGGCC TGTCGCTCAA CGCCAAAGTC
GCCTCGGCAC TGGCCCAGAT CGACGAACAA AGCCGCTCGG CCGGCCACCA GTTCGCAGCC
ATCACCACCG CAACCCAGGA ACAGAGCAGC ACTGCAACGA TGCTCAGCAG CAACCTGCAA
AGCATCGCCA TGGCCAACAG CGAACAACGC CAGGTCATGT CCAACCTCGC CATCACCGCT
CAGGAGCTCA ATGGCCTGGC GACCGAACTG CGTAACGAGG TTGACCGGTT TCGTTGA
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| Protein sequence | MSKPRTRIAS QLGIALAVIL AVVISGSTLF ALRSLDASNL VIREEHMSSE ARLLADQLST
FHSTLRDSTQ RLSGLFEKRF AGGLTLQTDK PVAVAGTQTP GLYLRDTALN NDFTEVDEFR
SMTAGVATIF VRSGDDFIRI STSLSKQDGT RAIGTVLDRK GTAYERLMAG QSYVGKAVLF
DRYYMTQYSP VRDSSGKIIA ALFVGFDYTD AQKTQFDNLK SFRIGSTGSL ALLDEKGTWL
VPPAGIKSLD GAAKAVADLA SKPGKAQFWN EGGGDFYSVG QPFAGGPWTV IASMPRSEIS
EVTWSVGTQL AIGSLLAMLI AVISAIWLLR SKLRPLSELV RQADALGAGD LSVRLNVTSN
DEIGQLSGSF NKMSEALSSM VSHIRTAAQE VSTRAHALSG LSGGAYEGME QQSGEITSMA
GAVEEFSATS MNIADNMGNT ERLAQENAQQ TRIGRTSMDE ASSSLQQIAT SLSSTATVID
TLGQRSQEIG SIVGVITSIA DQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLASRTRE
ATDEISGMIA SIQQETGNAI STMQQGNTLM QEGLSLNAKV ASALAQIDEQ SRSAGHQFAA
ITTATQEQSS TATMLSSNLQ SIAMANSEQR QVMSNLAITA QELNGLATEL RNEVDRFR
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