Gene CCC13826_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1039 
Symbol 
ID5595796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp842481 
End bp844451 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content39% 
IMG OID640929408 
Productprotease htpx 
Protein accessionYP_001466704 
Protein GI157165044 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0758551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGC GTAGCATCTT AGTCAAGGTC TCAGCGATCA TCGCTTTAGT TCTTGCCATT 
TGTATGGCTT GCTTTGTATT TTTTATATCA CATGTCTTAG AGCGTGAGAT CAAGGAGGGA
GTAGAAACAA CTATCCAGCA AAACGTTTCA CTTGCAATGG ATACGGTTGA GCTATTTGAT
GAAGATAACG AAGATAATGC AAAACTATAT ATGCATATCT TAAAAGAGGC TTTAGGCAAC
ATAAGAGCCA CTAGCCAAAC CATAAAAACA GAAAATGACG ATGCTGTAGA GCTTATCTCA
GATAAAATGG GCGTGCTAAA TAACAACCAT GAAATTTCTG ATAAGATCAA AAAACTAACA
AACGGCGGTA TCCCAACTAT CTTTGCAAAA TCAGGCAATG AATTTGCTGC TGTATCTACT
TCACTTTTAC TAGATGATGG CAGTAGAGCG CTTGGTATGC TAAATAAAAC GATCTATCCA
AAGATGATGA ACAAAGAGAC ATATGTGGGT GCTTTAAATA TTTTTGGTAG AAACTATATG
TGTGTTTATG AGCCAGTCAT TCAAAACGGC GAAGTTGTAG CAGTTTTATT TATAGGTTAT
GACTTCACTG AAGGCCTAGA AGATCTTCAA AAGACAATGG CACAAATGAA GCTAGGCGAG
CGTGGATACT TCTCAATCTT TAATACAAAG ACAAATGTCT ATGACATCCA CCCAAAACTA
GCTGGCAAAG CACCAGAAGG TCAGCTAAAA GATATAGTTG ATGACATAGT AAAAACTAAA
GAAGGTGTCA AACTCATAAA TACTGATGGA GTTGAGAGAG TGGTTGCTTT TGAGCCATTT
GATAAGCTTA ACTGGATAGT GCTTGGCTCA GCTGTGACCG ATGACTTTTT AACACCTCTA
AAAGTGGTTA GCAAAAACTT CATCATAGCA AGCATTATAG TTACATTGCT TCTTATCATA
GTATCTATCT TCTTGCTTAA AAAGCTAGTT GCAAATCCTA TTGATAGACT AGGAGCAAAT
TTAAATTCTA TAACATCTGA CTTTACTCTT AAAATTCCAA TCTACGGCAA AGATGAGATA
GCTAAAATAA GCAATGATAT AAATAACTTC ATAGAGCGCA TAAGGGTGCT TATAAGCGAC
ACTAAAAACC TCTCAAGTGA AAACAGCTCA GTTGCTAACG AGCTAAGCTC TACCTCACTT
CAAACAGGCA AACGCGTAGA AGAATCAACC CAGATCGTTG AAGAGACAAA TCAAAGATGT
AAGTCTATGC AAGAAGCTAT GAAAGAGTCA CTTTCAATTG CTCAAGCTGG CAAAGATGAC
CTTCAAAAGG CAAGCACTCA TATAAAAACA GCTACTGAGG CTATCAGAGC CCTATCATCT
CAGATCATAG ACTCTGCTAA TGTAGAAAAT CAAATGGCTG GCAAGATCGA GCAGCTTAGC
CGTGATGCAG AGCAGGTTAA ATCAGTGCTT GTTGTTATCA ACGATATAGC TGATCAGACA
AACCTACTTG CTCTTAACGC AGCCATTGAG GCAGCTCGTG CAGGTGAGCA TGGACGTGGC
TTTGCAGTCG TTGCTGACGA GGTTAGACAG CTAGCTGAGA GAACTCAAAA GTCTCTAACA
GAGATAAATG CAACTATCAA CGTTATCGTT CAAGCGATAA ATGATAGCAG CGAGCAAATG
GGTATCAACT CTAAACAAAT TCAAGAGCTA ACCCACGTTG CAAGCGACGT TGAAAAGACG
ATAAATGATA TGAGTGCAAC GATGAATAAC GCCATAGCGA TGTCTGACAA GACTATGCAA
GACTACATCG CAACTGGTAA AAACGTAAAT GAGATCATGG ATGGCATCTC AGAGATCAAT
CAAATTTCAT CTGAAAATGC TAGAAGCGTC GAAGAGATAG CTTCTGCAGC TGAACATCTA
AATAAGATGA CAGATGCGCT AAATACTAAA CTAAGCGTCT TTAGAACTTA A
 
Protein sequence
MNLRSILVKV SAIIALVLAI CMACFVFFIS HVLEREIKEG VETTIQQNVS LAMDTVELFD 
EDNEDNAKLY MHILKEALGN IRATSQTIKT ENDDAVELIS DKMGVLNNNH EISDKIKKLT
NGGIPTIFAK SGNEFAAVST SLLLDDGSRA LGMLNKTIYP KMMNKETYVG ALNIFGRNYM
CVYEPVIQNG EVVAVLFIGY DFTEGLEDLQ KTMAQMKLGE RGYFSIFNTK TNVYDIHPKL
AGKAPEGQLK DIVDDIVKTK EGVKLINTDG VERVVAFEPF DKLNWIVLGS AVTDDFLTPL
KVVSKNFIIA SIIVTLLLII VSIFLLKKLV ANPIDRLGAN LNSITSDFTL KIPIYGKDEI
AKISNDINNF IERIRVLISD TKNLSSENSS VANELSSTSL QTGKRVEEST QIVEETNQRC
KSMQEAMKES LSIAQAGKDD LQKASTHIKT ATEAIRALSS QIIDSANVEN QMAGKIEQLS
RDAEQVKSVL VVINDIADQT NLLALNAAIE AARAGEHGRG FAVVADEVRQ LAERTQKSLT
EINATINVIV QAINDSSEQM GINSKQIQEL THVASDVEKT INDMSATMNN AIAMSDKTMQ
DYIATGKNVN EIMDGISEIN QISSENARSV EEIASAAEHL NKMTDALNTK LSVFRT