Gene Dtox_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2016 
Symbol 
ID8428998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2184338 
End bp2185897 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content42% 
IMG OID645034343 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003191474 
Protein GI258515252 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.103091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC GTCTCAAACT CTCTCTGCTT AACACCTTTT TCTTAATTCT TCTCCTAGCT 
GTTGTGGGTA TCTTCTCAAT AAACTCAATT CACTCCAGGT TAATTGAATC TTCTCAAATA
AAATTAAAAT CGGATTTAGG TATGAGTAGA AATCTCATCG AGCAGACCTA TCCCGGTCAA
TGGTCTGTAC GCGAGGGGAT GCTCTACAAG GGTGATGTTA AAATCAATGA CAACTATGAA
ATAGTCGATA AAATCGGTTC AATTACCGGT GACACTGCCA CAATTTTTCA AGGCGACAGG
CGGGTATCCA CTAATGTTAA ATCTGCTGAC GGAAAGCGGG CTATCGGAAC GCGGGCTGCT
GCTGAGGTAA TACAAACAGT TATTACACGG GGACAAACCT ATACGGGCAA AGCACAGGTG
GTTGGCGAAT GGAATCAAAC CGCGTATGAA CCAATAACTG ACAGTCAGGG CAAAGTTATT
GGAATGCTTT ATGTAGGCGT TCCTAACAAT CTCTATGACC AGACACTCAA AAAATTAACT
TTTGAAATTA TACTTTTCGG TATTATCGGT TTAGTATTGA GTATTTTGCT TTCAAACTAC
CTGTTAAGGA GAATTTTTGT CAAGCCTATA CAACATTTCA TAGAGTTTTC GGAAATCATA
TCAAATGGCG ATTTTTCACA AGAAATCACA TATAATTCAA AAGATGAATT CGGTAAACTG
GCTCAAGCTT TTAATAAAAT TACTCATAAC CTAAAAGATA TAACCGGCCA AACCACTGTT
ATATGTAATA AAGCAACTGA TACGGCTAAC ACACTGGCCT CCCAGGCAGC TCAAACTTCT
TCTGCTACTG TAGAAAATGC CTCCACTGTC AGTGAGATCT CAGCAACCGT AGACTCCATG
GCACAAAATA TTAAAGAGGT GTCTGGCCAG GCTGAAGAAG CCAGCCGCCA GGCCCAACAA
GGACAAGAAA ATATAGAGAG AATAGTATCA AGCATGCATG ATATTGAATG TTCAGTAGGT
CACGTGTCTG ATTCCTTGAA TTCACTGAAT CAAGCTATAG GGAATATCGG ACAGTTTGTG
GATACTATTA ACAATATTGC CGAACAAACT AACCTCTTGG CCCTTAACGC TGCCATAGAG
GCGGCACGGG CTGGTGAAGC CGGCAAAGGT TTTGCTGTGG TTGCCGATGA AGTTAGAAAA
CTTGCCGAGG GTTCTGCCAA ATCAGCCAGT GAAACCAGAC AAATCATCAC TGCCGTACAG
GCGCAATCAA ACCAAGCTGT AAAGAATATG GAAGTCAGTA AGGAAGAGGT AACCCGGGGA
GACAGGGTAA TCCGAGAGGT AAGTCAATCA CTGGTGGCCA TAACCGGTTA TATTCAAAAT
CTTAGCCAAA AGGCTCAAGA AATAGCTCAG GCTTCAACTC AGGTAGCGGA TGCCGTACAA
AATGTGGCAG CTACTACGGA GGAACAAACT GCTGCGATAG AGCACATCTC ATGTTCAGCT
GCGGAAATGA ATGATTATGC TGCACAAATG TATAAAGAAC TGCAGAGATT CAAACTTTAA
 
Protein sequence
MSIRLKLSLL NTFFLILLLA VVGIFSINSI HSRLIESSQI KLKSDLGMSR NLIEQTYPGQ 
WSVREGMLYK GDVKINDNYE IVDKIGSITG DTATIFQGDR RVSTNVKSAD GKRAIGTRAA
AEVIQTVITR GQTYTGKAQV VGEWNQTAYE PITDSQGKVI GMLYVGVPNN LYDQTLKKLT
FEIILFGIIG LVLSILLSNY LLRRIFVKPI QHFIEFSEII SNGDFSQEIT YNSKDEFGKL
AQAFNKITHN LKDITGQTTV ICNKATDTAN TLASQAAQTS SATVENASTV SEISATVDSM
AQNIKEVSGQ AEEASRQAQQ GQENIERIVS SMHDIECSVG HVSDSLNSLN QAIGNIGQFV
DTINNIAEQT NLLALNAAIE AARAGEAGKG FAVVADEVRK LAEGSAKSAS ETRQIITAVQ
AQSNQAVKNM EVSKEEVTRG DRVIREVSQS LVAITGYIQN LSQKAQEIAQ ASTQVADAVQ
NVAATTEEQT AAIEHISCSA AEMNDYAAQM YKELQRFKL