| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0524 |
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| Symbol | |
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| ID | 4278657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 595234 |
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| End bp | 596853 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133282 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_749223 |
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| Protein GI | 114561710 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGT TTAGTAACAT GTCAATCTTT AAAAAGGTTG GATTGATTTT TGTGTTATCG
GTTATTATTT TTGCCGTTAA CCTTGGTATC AGCACTGTTG CGATTAATAA AAATCGTGAC
ACCTTGTCTT TCATGGAAAC CAAGGTGGCA CACCGGGTTG AACTTGCAAA TCAAAATGTC
ATTTATGTAC AACGCTTAGA TGAGTTATAT ACTCAAGCGG TATCGTTTGC AGATGAAGAT
TTACTTGAGA ACGCCAATAA AACGTTTGTT TCACTTAACG ATAATTTAAC CGACTTATCA
ACTACCGATC AGCAAGAAAC TGCAGTTTTA TCGCAATTAT CTAACAACCT CAATGAATAC
AATACCATGA CACTATCATT GGCTAGAGGC ATGCTTGATG GCACGATCGA TATGGCAGAT
GTGGGACAAA TTAGTCAGAA AAAAGCTAAG ATTTTCGATA AACTGACCAA CGGAATTACT
GTTTATAAAG CCGACAAAGT GGATGAGTTT AGCTCTACCA TTAAAGAAGC TGGCGACCGT
TCAGAGCAAA GTTTATATCT TTCATTTAGC ATCGGTATCG CATTATTGGT ATTTATGGCA
CTTGCTACCA TTTCTATTGC ACGTGCCATC AGTGGTTCTG CTGGTGATGT GGCAAACTCA
TTGGGTGAGT TAGCAGATGG TAAAGGTAAC TTACGCCACC AATTGACGGT TGCAGGTACT
GATGAACTGG GGCAAGTATC GAGTAATTTT AACCGTTTTT TACGTTTATT AGCTGACTCT
ATTCAACGTG TAGTCAGTGT AACCAGTCCA TTATTAGACA GTGCGTCATC GCTAAAAGAA
CGTATGGCTG TAGCGACTAA GGCAACCAAG CAACAAAGCC ACGATGCTAA AGCCGTGCAT
ATGTCGATGG AAGAAATGCG CCACTCGGTG AATGACATTT CACATAGTGC CCAGCAAGCG
GCAGAAGCTG CGCAAGTTGC TGAACGAGAA GCGACGGAGG GCTTGGCTGT AGTACAACGT
ACAGTGAGAA TTTCACAAGA ACTTAACTCC GGTATTGAGC TGGCATCTAA CTCCATTCAT
GAATTAGCCA AAGATACCGA AAGTGTTGGC TCTATTTTGA ACGTAATTAC CTCTATTGCA
GATCAAACAA ACTTATTGGC GTTAAATGCC GCTATTGAAG CAGCTAGAGC GGGTGAGCAT
GGGCGAGGTT TTGCCGTTGT TGCTGATGAA GTTCGTGCAC TTGCTTCTAA AACGGCAGAC
GCGACTAAAG AAATTCGTGG TGTACTAGAG AAGCTTAAAA TCGCAGCTGA ATCATCGGTA
AGTACTATGG ATGTGGCGAT TACTAAGTCA TCAGAAAACG AACGTTATGC TAAAGATACC
GGTGAAGTAT TAAGCTCAAT TCAATCTAAA ATTGTCAGTA TTAATAGTAT GAATACTCAT
ATTGCTTCAG CCACTGAACA GCAATCTTTG GTTGCTGCAC ATGTGGCGAA TAATGTGGTT
GAAATGAATG CATCATTTGA ACAAACATTG GGTATTCTTG CAGAAGTGCA GGGCATTTCA
GAAGGATTAG ATGGTTTTGC TAATGAGCTT AACCACGCTA CCTCACAGTT TAAATTGTAA
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| Protein sequence | MNWFSNMSIF KKVGLIFVLS VIIFAVNLGI STVAINKNRD TLSFMETKVA HRVELANQNV
IYVQRLDELY TQAVSFADED LLENANKTFV SLNDNLTDLS TTDQQETAVL SQLSNNLNEY
NTMTLSLARG MLDGTIDMAD VGQISQKKAK IFDKLTNGIT VYKADKVDEF SSTIKEAGDR
SEQSLYLSFS IGIALLVFMA LATISIARAI SGSAGDVANS LGELADGKGN LRHQLTVAGT
DELGQVSSNF NRFLRLLADS IQRVVSVTSP LLDSASSLKE RMAVATKATK QQSHDAKAVH
MSMEEMRHSV NDISHSAQQA AEAAQVAERE ATEGLAVVQR TVRISQELNS GIELASNSIH
ELAKDTESVG SILNVITSIA DQTNLLALNA AIEAARAGEH GRGFAVVADE VRALASKTAD
ATKEIRGVLE KLKIAAESSV STMDVAITKS SENERYAKDT GEVLSSIQSK IVSINSMNTH
IASATEQQSL VAAHVANNVV EMNASFEQTL GILAEVQGIS EGLDGFANEL NHATSQFKL
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