| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0622 |
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| Symbol | |
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| ID | 4602875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 775744 |
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| End bp | 777363 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639779957 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_926500 |
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| Protein GI | 119773760 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.321986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGGT TTAATAACCT TCCCATCTTT AAAAAAGTCG GTGTCATCTT CATCATTTCG
GTGATCATCT TTGCGGTGAA TCTGGCCATC AGTCTGGTCT CTATCAATAA AAATCGCGAA
ACCCTGGGAT TTATGGAAGA GAAGATTTAC CAGCGGGTTG AACTGGCCAA CCAAAATTTG
ATGTTGGTGC AGCGGCTTGA GGAGGTATAC ACCCAGGCGG TGTCATTTGC CGATGAAGAC
CTATTGGAGC AAGCCGGCAG CCTGCATGAC AACCTTGCCG CCAACCTTAC GTTGTTACAG
AGCTCAGACA TAAAAGAAAC CGACACGCTT CGACAGATGC TGTCGCAGCT CGCCAGCTAT
AACCAAATAA CCTCTGGCCT GGCAAAGAGC ATGTTGGATG GAACTGCAGA CATGGCCAAC
ATAGGCGCCA TCAGTCAGAA AAAGTCCGCT GTGTATGAAA CCCTGCTGGG TCATGTGCAG
CAATACAAGC AGGCCAAGGT ATTGGAGTTC AAAAATACCA TCAAGGAGGC AGCAGACAGA
TCGCAAAACA GTCTCTGGTT GACCATGGTG GTGGGAGTGG TGCTGCTGCT GTTTATGGCC
ATAGTGACCA TATCCATCGC CCGTGCTATC AGCGCCAGTG CTAAAGGGGT GGCCCATTCC
CTTGGTGAAC TCGCCGATGG CAAGGGAGAT TTGCGCCACC AACTACCAGC CAGCAGTCGG
GACGAACTCG GGCAGGTATC CGGTAACTTC AATCGCTTTT TGGGACTCCT GGCAGGCTCA
ATCCAGAGGG TGGTGAATGT AACCTCGCCG TTACTCAACA ACGCCCATGA TTTGAAAGAC
AAGATGGAAA CGGCAACGGG CGCTACCCAG CGTCAGAGTC ATGATGCTCA AACCGTTCAG
GCATCTATGG AAGAGATGCG GCTGTCGGTA ATTGATATTT CCCATAATGC CAGTCAGGCG
GCAGATGCAG CGCAAATAGC AGAGCGTGAA GCCATGGACG GGATGGCGGT GGTGCAGCGT
ACCATGGACA TCTCCCTGGA GTTGAACCGC GAAATTGAAC ATGCGGCCAA CGCCATTAAT
GAATTGGCAA AAGATACTGA AAGTGTCAGT TCGATACTGA ATGTCATCAC CTCCATCGCC
GAGCAAACCA ACCTGTTGGC ACTGAATGCG GCCATTGAGG CTGCCCGCGC CGGAGAGCAG
GGCAGAGGTT TTGCCGTTGT AGCAGACGAA GTGCGTGCTC TGGCTTCGAA AACCGCCGAT
GCCACCAAGG AAATTCGTGA GGTGCTGACC AGGCTCAAGG GCGCCGCAGA GTCGTCAGTC
AGTACCATGA CGGTGGCCAT GTCCAAGTCG AGTGAGAACG AGGAGCATGC CCAGAAGACG
GGGTTGGCAC TCAAGACGAT TCAAGAACAA ATTGTCAGTA TCAATGCCAT GAACACCCAT
ATTGCCAGGT CAACCGATGA ACAGTCTCAG GTGGCCTCCA GGGTGGTGGA TAATGTGGTG
GATATGAATG CTTCATTCGA ACAAACCCTG AGTATTCTGG ATCAAGTGCA TCAGGTCTCG
TCGGAATTGT CAGAGTTTGC CGAAGAGCTG CAAAGCGCCA CGTCTCAATT TAAGCTTTAA
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| Protein sequence | MTWFNNLPIF KKVGVIFIIS VIIFAVNLAI SLVSINKNRE TLGFMEEKIY QRVELANQNL
MLVQRLEEVY TQAVSFADED LLEQAGSLHD NLAANLTLLQ SSDIKETDTL RQMLSQLASY
NQITSGLAKS MLDGTADMAN IGAISQKKSA VYETLLGHVQ QYKQAKVLEF KNTIKEAADR
SQNSLWLTMV VGVVLLLFMA IVTISIARAI SASAKGVAHS LGELADGKGD LRHQLPASSR
DELGQVSGNF NRFLGLLAGS IQRVVNVTSP LLNNAHDLKD KMETATGATQ RQSHDAQTVQ
ASMEEMRLSV IDISHNASQA ADAAQIAERE AMDGMAVVQR TMDISLELNR EIEHAANAIN
ELAKDTESVS SILNVITSIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRALASKTAD
ATKEIREVLT RLKGAAESSV STMTVAMSKS SENEEHAQKT GLALKTIQEQ IVSINAMNTH
IARSTDEQSQ VASRVVDNVV DMNASFEQTL SILDQVHQVS SELSEFAEEL QSATSQFKL
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