167 homologs were found in PanDaTox collection
for query gene Mmc1_0132 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0132  restriction modification system DNA specificity subunit  100 
 
 
427 aa  890    Magnetococcus sp. MC-1  Bacteria  normal  normal  0.47299 
 
 
-
 
NC_011061  Paes_2397  restriction modification system DNA specificity domain  37.14 
 
 
417 aa  240  4e-62  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000238697  n/a   
 
 
-
 
NC_007484  Noc_0446  restriction modification system DNA specificity subunit  34.3 
 
 
434 aa  214  1.9999999999999998e-54  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.0000807768  n/a   
 
 
-
 
NC_007947  Mfla_1216  restriction modification system DNA specificity subunit  31.29 
 
 
427 aa  187  2e-46  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0448  restriction modification system DNA specificity domain  32.57 
 
 
435 aa  188  2e-46  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00000159098 
 
 
-
 
NC_011060  Ppha_0745  restriction modification system DNA specificity domain  33.85 
 
 
411 aa  178  2e-43  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.189202  n/a   
 
 
-
 
NC_009052  Sbal_3717  restriction modification system DNA specificity subunit  31.4 
 
 
427 aa  175  1.9999999999999998e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3549  restriction modification system DNA specificity subunit  38.78 
 
 
296 aa  171  2e-41  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.348533  normal 
 
 
-
 
NC_011206  Lferr_2009  restriction modification system DNA specificity domain  30.96 
 
 
423 aa  164  2.0000000000000002e-39  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.999718  normal  0.91224 
 
 
-
 
NC_013216  Dtox_2621  restriction modification system DNA specificity domain protein  33.03 
 
 
400 aa  161  2e-38  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2378  type I restriction-modification system, S subunit  35.74 
 
 
383 aa  160  3e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1087  restriction modification system DNA specificity subunit  31.61 
 
 
437 aa  160  5e-38  Opitutus terrae PB90-1  Bacteria  normal  0.0762586  normal 
 
 
-
 
NC_008740  Maqu_0414  restriction modification system DNA specificity subunit  31.96 
 
 
439 aa  131  2.0000000000000002e-29  Marinobacter aquaeolei VT8  Bacteria  normal  0.405933  n/a   
 
 
-
 
NC_009718  Fnod_0507  restriction modification system DNA specificity subunit  29.71 
 
 
429 aa  130  5.0000000000000004e-29  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1496  restriction modification system DNA specificity domain protein  30.77 
 
 
427 aa  129  7.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.136919  normal 
 
 
-
 
NC_011898  Ccel_2722  restriction modification system DNA specificity domain protein  29.79 
 
 
385 aa  129  1.0000000000000001e-28  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0959  restriction modification system DNA specificity domain protein  28.86 
 
 
442 aa  124  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1858  restriction modification system DNA specificity subunit  29.02 
 
 
456 aa  120  4.9999999999999996e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008573  Shewana3_4163  restriction modification system DNA specificity subunit  25.7 
 
 
405 aa  118  1.9999999999999998e-25  Shewanella sp. ANA-3  Bacteria  normal  0.864984  normal  0.0584456 
 
 
-
 
NC_008043  TM1040_3550  restriction modification system DNA specificity subunit  31.78 
 
 
417 aa  117  5e-25  Ruegeria sp. TM1040  Bacteria  normal  0.257959  normal  0.256697 
 
 
-
 
NC_010085  Nmar_0607  restriction modification system DNA specificity subunit  26.42 
 
 
438 aa  105  2e-21  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009637  MmarC7_0016  restriction modification system DNA specificity subunit  23.54 
 
 
432 aa  102  1e-20  Methanococcus maripaludis C7  Archaea  normal  0.0597513  hitchhiker  0.0012471 
 
 
-
 
NC_009832  Spro_4083  restriction modification system DNA specificity subunit  24.51 
 
 
409 aa  98.6  2e-19  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009036  Sbal_4462  restriction modification system DNA specificity subunit  22.92 
 
 
349 aa  94.4  3e-18  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3953  restriction modification system DNA specificity domain protein  25.12 
 
 
413 aa  94  5e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4622  Restriction endonuclease S subunits-like protein  27.94 
 
 
411 aa  93.6  5e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.156513 
 
 
-
 
NC_007955  Mbur_0508  restriction modification system DNA specificity subunit  30.73 
 
 
511 aa  92.8  1e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1357  restriction modification system DNA specificity domain  28.96 
 
 
425 aa  92.4  1e-17  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0971497  n/a   
 
 
-
 
NC_011884  Cyan7425_3075  restriction modification system DNA specificity domain protein  25.87 
 
 
388 aa  91.7  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.40504  normal 
 
 
-
 
NC_011898  Ccel_2724  restriction modification system DNA specificity domain protein  33.02 
 
 
409 aa  91.3  3e-17  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_04450  restriction modification system DNA specificity domain protein  32.18 
 
 
422 aa  91.3  3e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2423  restriction modification system DNA specificity subunit  33.94 
 
 
426 aa  90.9  4e-17  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.57431  normal 
 
 
-
 
NC_013411  GYMC61_0287  restriction modification system DNA specificity domain protein  26.52 
 
 
429 aa  90.1  7e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01116  hypothetical protein  25.24 
 
 
400 aa  89.4  1e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007575  Suden_0944  restriction modification system DNA specificity subunit  27.1 
 
 
420 aa  88.2  2e-16  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000962716  n/a   
 
 
-
 
NC_013411  GYMC61_1674  restriction modification system DNA specificity domain protein  29.21 
 
 
477 aa  88.6  2e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008043  TM1040_3540  restriction modification system DNA specificity subunit  30.68 
 
 
387 aa  86.7  7e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_1911  hypothetical protein  24.63 
 
 
453 aa  86.3  9e-16  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.568524  n/a   
 
 
-
 
NC_011059  Paes_0308  restriction modification system DNA specificity domain  24.21 
 
 
456 aa  86.3  0.000000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0548885  normal  0.428283 
 
 
-
 
NC_009483  Gura_2097  restriction modification system DNA specificity subunit  26.2 
 
 
393 aa  85.1  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0777  type I restriction modification DNA specificity domain-containing protein  25.31 
 
 
422 aa  84.7  0.000000000000003  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00318537  n/a   
 
 
-
 
NC_011830  Dhaf_3951  restriction modification system DNA specificity domain protein  25.53 
 
 
406 aa  84.7  0.000000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0988  type I restriction-modification system, S subunit  28.15 
 
 
401 aa  84  0.000000000000005  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.271922  n/a   
 
 
-
 
NC_013037  Dfer_5244  restriction modification system DNA specificity domain  25.56 
 
 
422 aa  83.2  0.000000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0750  restriction endonuclease S subunit  23.47 
 
 
387 aa  80.9  0.00000000000004  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20210  restriction modification system DNA specificity domain protein  31.36 
 
 
565 aa  80.9  0.00000000000004  Halothermothrix orenii H 168  Bacteria  normal  0.266778  n/a   
 
 
-
 
NC_008786  Veis_3129  restriction modification system DNA specificity subunit  26.95 
 
 
416 aa  80.9  0.00000000000005  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.343622  normal  0.0250234 
 
 
-
 
NC_012917  PC1_0864  restriction modification system DNA specificity domain protein  27.08 
 
 
413 aa  80.1  0.00000000000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0689213  n/a   
 
 
-
 
NC_013946  Mrub_2452  restriction modification system DNA specificity domain-containing protein  22.88 
 
 
419 aa  80.1  0.00000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.587532 
 
 
-
 
NC_011726  PCC8801_2214  restriction modification system DNA specificity domain protein  26.73 
 
 
457 aa  80.1  0.00000000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0842  type I restriction-modification enzyme, S subunit, putative  31.32 
 
 
476 aa  77  0.0000000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0967  restriction modification system DNA specificity domain  24.34 
 
 
426 aa  76.3  0.0000000000009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.800586  normal  0.821104 
 
 
-
 
NC_009135  MmarC5_1170  restriction modification system DNA specificity subunit  28.93 
 
 
402 aa  76.3  0.0000000000009  Methanococcus maripaludis C5  Archaea  normal  0.249165  n/a   
 
 
-
 
NC_013235  Namu_1103  restriction modification system DNA specificity domain protein  24.15 
 
 
400 aa  76.6  0.0000000000009  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0442932  normal 
 
 
-
 
NC_013456  VEA_003235  type I restriction-modification system specificity subunit S  26.77 
 
 
437 aa  76.3  0.000000000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4042  restriction modification system DNA specificity subunit  26.42 
 
 
428 aa  75.9  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  23.27 
 
 
425 aa  75.5  0.000000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3537  putative type I restriction-modification system, S subunit  25.64 
 
 
419 aa  74.7  0.000000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0382  type I restriction-modification system, S subunit  28.03 
 
 
439 aa  73.9  0.000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008573  Shewana3_4241  restriction modification system DNA specificity subunit  24.24 
 
 
411 aa  72.8  0.00000000001  Shewanella sp. ANA-3  Bacteria  normal  0.491612  hitchhiker  0.00127278 
 
 
-
 
NC_012918  GM21_0429  restriction modification system DNA specificity domain protein  29.15 
 
 
404 aa  72.8  0.00000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_3010  restriction modification system DNA specificity subunit  24.74 
 
 
549 aa  72  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.340841  normal 
 
 
-
 
NC_013440  Hoch_2792  restriction modification system DNA specificity domain protein  26.05 
 
 
423 aa  71.2  0.00000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.313089  normal 
 
 
-
 
NC_008639  Cpha266_0895  N-6 DNA methylase  27.54 
 
 
834 aa  70.9  0.00000000004  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2909  restriction modification system DNA specificity subunit  21.87 
 
 
440 aa  70.9  0.00000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0504  restriction modification system DNA specificity domain protein  26.9 
 
 
408 aa  70.9  0.00000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3089  restriction modification system DNA specificity domain protein  28.93 
 
 
520 aa  70.5  0.00000000005  Spirosoma linguale DSM 74  Bacteria  normal  0.497517  normal  0.376247 
 
 
-
 
NC_010465  YPK_3673  restriction modification system DNA specificity subunit  26.85 
 
 
410 aa  70.1  0.00000000007  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0829  type I restriction-modification system, S subunit  24.55 
 
 
409 aa  70.1  0.00000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.232689  n/a   
 
 
-
 
NC_010816  BLD_1960  restriction endonuclease S subunit  25.48 
 
 
413 aa  68.9  0.0000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.323459  n/a   
 
 
-
 
NC_011886  Achl_1095  hypothetical protein  23.43 
 
 
401 aa  69.7  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010655  Amuc_1914  restriction modification system DNA specificity domain  21.83 
 
 
386 aa  68.9  0.0000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  hitchhiker  0.00381757 
 
 
-
 
NC_013161  Cyan8802_3132  restriction modification system DNA specificity domain protein  25.25 
 
 
424 aa  68.9  0.0000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.474681 
 
 
-
 
NC_007908  Rfer_1060  restriction modification system DNA specificity subunit  27.66 
 
 
397 aa  67.8  0.0000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.588803  n/a   
 
 
-
 
NC_014148  Plim_1220  restriction modification system DNA specificity domain protein  25 
 
 
620 aa  68.2  0.0000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0030  restriction modification system DNA specificity subunit  24.64 
 
 
447 aa  67.4  0.0000000005  Rhodoferax ferrireducens T118  Bacteria  normal  0.539395  n/a   
 
 
-
 
NC_007955  Mbur_1842  restriction modification system DNA specificity subunit  24.82 
 
 
391 aa  66.6  0.0000000007  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3525  restriction modification system DNA specificity subunit  23.53 
 
 
420 aa  65.9  0.000000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2086  restriction modification system DNA specificity domain protein  25.64 
 
 
417 aa  66.2  0.000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000683293 
 
 
-
 
NC_013203  Apar_0198  restriction modification system DNA specificity domain protein  25.93 
 
 
386 aa  65.1  0.000000002  Atopobium parvulum DSM 20469  Bacteria  normal  0.719886  decreased coverage  0.000218103 
 
 
-
 
NC_009801  EcE24377A_0287  type I restriction modification DNA specificity domain-containing protein  24.65 
 
 
471 aa  65.1  0.000000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0227  restriction modification system DNA specificity domain  21.73 
 
 
395 aa  65.5  0.000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_2673  restriction modification system DNA specificity subunit  25.98 
 
 
415 aa  64.7  0.000000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.574489 
 
 
-
 
NC_010814  Glov_0637  restriction modification system DNA specificity domain  30 
 
 
422 aa  63.5  0.000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1195  type II restriction-modification enzyme  26.46 
 
 
1343 aa  63.2  0.000000008  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2391  restriction modification system DNA specificity subunit  25.9 
 
 
374 aa  63.5  0.000000008  Marinobacter aquaeolei VT8  Bacteria  normal  0.164769  n/a   
 
 
-
 
NC_010513  Xfasm12_2272  type I restriction system specificity protein  25.14 
 
 
399 aa  62.4  0.00000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0149  restriction modification system DNA specificity subunit  20.22 
 
 
400 aa  63.2  0.00000001  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1954  restriction modification system DNA specificity subunit  29.03 
 
 
406 aa  62  0.00000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2028  restriction modification system DNA specificity subunit  25.16 
 
 
391 aa  61.6  0.00000002  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000400239 
 
 
-
 
NC_007514  Cag_1122  restriction endonuclease S subunits-like  25.77 
 
 
428 aa  61.2  0.00000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.878738  n/a   
 
 
-
 
NC_009483  Gura_1027  restriction modification system DNA specificity subunit  26.42 
 
 
420 aa  61.6  0.00000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_3109  restriction modification system DNA specificity subunit  24.68 
 
 
426 aa  61.2  0.00000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_1176  restriction modification system DNA specificity subunit  25.24 
 
 
408 aa  60.8  0.00000004  Methylobacillus flagellatus KT  Bacteria  normal  0.882603  normal 
 
 
-
 
NC_008699  Noca_1105  restriction modification system DNA specificity subunit  22.54 
 
 
225 aa  60.8  0.00000004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0387  restriction modification system DNA specificity domain  23.31 
 
 
435 aa  60.8  0.00000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0681662  n/a   
 
 
-
 
NC_009438  Sputcn32_0160  restriction modification system DNA specificity subunit  28.47 
 
 
399 aa  60.5  0.00000005  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0098  restriction endonuclease S subunits  23.53 
 
 
315 aa  59.7  0.00000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1037  restriction modification system DNA specificity domain  22.73 
 
 
364 aa  59.3  0.0000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0890662  normal 
 
 
-
 
NC_009135  MmarC5_0615  restriction modification system DNA specificity subunit  26.6 
 
 
417 aa  59.7  0.0000001  Methanococcus maripaludis C5  Archaea  normal  0.0545068  n/a   
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>