| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0132 |
|---|
| Symbol | |
|---|
| ID | 4481021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 139029 |
|---|
| End bp | 140312 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639720877 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_864065 |
|---|
| Protein GI | 117923448 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.47299 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG CTATGAAAGA CGAGAAGAAG GCGCTTGTAC CCCGGTTGCG GTTTCCCGAG
TTTCGGGATG CTGGGGAGTG GGAGAAAACG ACAATTGGAG AAATTGGAAA ATTTTATTAT
GGCAAAAGCG CTCCTAAGTG GTCTTTGGAA GAAGATGCTC CAACTCCATG CGTAAGATAC
GGTGAGCTAT ATACTAAGTT TGGGCCTATT ATCACTGAAA CATATTCGCG CACCAATATA
GATCCTGGTA AATTGCGGTT TAGCAAAGGC GGGGAAATCC TTGTCCCTCG AGTTGGCGAG
AAAACCGAGG ATTTTGGTAA GTGTTGTTGC TACCTACCAT TGGGGGATAT CGCAATTGGT
GAAATGATAA GCGTGTTTGA GACAGCGCAA AATCCGTTGT TCTATACATA TTACTTCAGA
AGGTTGTACA GGCAATTTTC GAAGGTTGTG GAGGGGCAAA ATGTTAAAAA TCTATACTAT
GTTGAGCTAG AGCCGCTTGA AATTTATCGC CCGCCTTTAA CTGAACAACA AAAAATCGCC
GATTGCCTCT CCTCCCTCGA CGCCCTGATC GCCGCCCAGG CGGACAAAAT CGACGCCCTC
AAGACCCACA AAAAAGGGCT GATACAGCAA CTCTTCCCCC GCGAGGGCAA AACCGTCCCT
CGGCTGCGCT TTCCCGAGTT TCAGGAGGCC GGGGAGTGGA CAGAGCATAG GCTTGAGAAT
ATGGCAAAAA GAGGCTCGGG GCATACGCCT AACAAAAAGT TCCCGAGCTA TTACAATGGC
GGAATAAAGT GGGTATCTCT TGCTGATTCC AATAAGCTGG ATGATGGATA TATTTATGAT
ACTAAAGTCG AGATTTCTGA CGATGGTATT AATAACTCAT CAGCCGTCCT ATATCCTGCG
GGGACGGTGA TTCTTAGTCG AGATGCTGGG GTTGGGAAAA GCGCGGTTCT TTATTCACCA
ATGGCGGTAA GTCAGCATTT CATGGCTTGG CAATGCTATG AAAACATGCT CTCGAATTGG
TTTTTTTACT ATCTCCTGCA AAAACTGAAG GCCACTTTTG AATCTATTGC GGTAGGGAAT
GCTATCAAGA CGATTGGGGC TGCCTATTTT AAAGAAATGA CGATAACGGC GCCCTCCTTA
CCTGAGCAAC AAAAAATCGC CGACTGCCTC GTCTCCCTTG ATGGGATGAT TGCCGCCCAC
ACCGAAAAGC TCGATTCACT CAAGACCCAC AAAAATGGGC TGATGCAGCA ACTCTTCCCC
AGCCCGGAGG CGGTGGAGGC ATGA
|
|---|
| Protein sequence | MSKAMKDEKK ALVPRLRFPE FRDAGEWEKT TIGEIGKFYY GKSAPKWSLE EDAPTPCVRY
GELYTKFGPI ITETYSRTNI DPGKLRFSKG GEILVPRVGE KTEDFGKCCC YLPLGDIAIG
EMISVFETAQ NPLFYTYYFR RLYRQFSKVV EGQNVKNLYY VELEPLEIYR PPLTEQQKIA
DCLSSLDALI AAQADKIDAL KTHKKGLIQQ LFPREGKTVP RLRFPEFQEA GEWTEHRLEN
MAKRGSGHTP NKKFPSYYNG GIKWVSLADS NKLDDGYIYD TKVEISDDGI NNSSAVLYPA
GTVILSRDAG VGKSAVLYSP MAVSQHFMAW QCYENMLSNW FFYYLLQKLK ATFESIAVGN
AIKTIGAAYF KEMTITAPSL PEQQKIADCL VSLDGMIAAH TEKLDSLKTH KNGLMQQLFP
SPEAVEA
|
|---|
| |