| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1954 |
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| Symbol | |
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| ID | 4278866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2319199 |
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| End bp | 2320419 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134741 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_750638 |
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| Protein GI | 114563125 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGT TGAACTATTT AGAGAAACTG CTGGATGGGG TAGATGTTGA GTGGAAACCA
TTAGATGACA TTTCTGTAAA GATTTCTTCT GGTGGTACAC CAAAAACAGG TGTTGCCGAA
TTTTATGATG GTGATATTCC TTGGCTGCGT ACTCAAGAAG TTAATTTTGA TGAAATCTGG
GATACTGGCG TAAAAATTAC TGAAGCTGGA GTTGATAACT CAAGCGCAAA ATGGATTCCT
GCAAATTGCG TTATTGTAGC TATGTATGGA GCAACGGTTG GGAAAATTGG CATTAACAAA
ATTCCTATGA CCACAAATCA AGCATGCGCG AACATACAAC TAGATGGGAA TATAGCTAAT
TACCGATATG TGTTTCATTT TTTATTAAGC CAATATGAAT ATATAAAGTC ACTCGGGTCT
GGCTCGCAGA CCAATATTAA TGCGGGAATA GTAAAAAAAC TTGTAGTCCC CATCCCATGC
CCAAATAACC CAGAAAAATC GCTGGCAATA CAAGCTGAAA TAGTGCGTAT TCTGGACGCA
TTTACCGCCA TGACCGCCGA GCTGACCGCC GAGCTTATCA TGCGGAAAAA ACAATACAAC
TACTACCGCG ACCAGTTGCT AAGTTTTGAA GAGGGTGAAG TTGAGTGGAA GACGTTGGGC
GACCTTGCAG AAAATCTGGA CTCAAAGCGT AAGCCTATAA CCAGTGGTCT GAGAGAAGCT
GGCGAAATTC CATACTACGG TGCATCTGGT ATCGTCGATT ATGTCAAGGA TTACATATTT
GACGGTGATT ACTTATTAGT CTCTGAGGAT GGCGCAAATT TATTAGCCCG TAATACGCCT
ATAGCATTTA GTATTAGTGG TAAAACATGG GTAAACAATC ATGCTCACGT GCTTAAATTT
GAAACTTACG CGGAGAGGAA GTACGTTGAA TACTATCTGA ACAGTATCGA CCTAACTCCT
TACATTTCTG GAGCAGCCCA ACCAAAGTTG AATAAGAAGA ACTTGGAAAG TATAAATATT
CCAAATCCAG CGCCTAAAGA AAAAGAACGC ATTGTGGCTA TCTTAGATAA ATTTGATTCT
TTGACCTGTT CAATTAAAGA AGGTCTGCCC CGCGAAATAG AACTCCGCCA AAAGCAATAC
GAGTATTATC GTGACCTGTT GTTGAGCTTC CCTGCCAGTC CGGCAGGCGG GCCTCAATCT
CATTCAGATG AGGCGGCTTA A
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| Protein sequence | MSQLNYLEKL LDGVDVEWKP LDDISVKISS GGTPKTGVAE FYDGDIPWLR TQEVNFDEIW
DTGVKITEAG VDNSSAKWIP ANCVIVAMYG ATVGKIGINK IPMTTNQACA NIQLDGNIAN
YRYVFHFLLS QYEYIKSLGS GSQTNINAGI VKKLVVPIPC PNNPEKSLAI QAEIVRILDA
FTAMTAELTA ELIMRKKQYN YYRDQLLSFE EGEVEWKTLG DLAENLDSKR KPITSGLREA
GEIPYYGASG IVDYVKDYIF DGDYLLVSED GANLLARNTP IAFSISGKTW VNNHAHVLKF
ETYAERKYVE YYLNSIDLTP YISGAAQPKL NKKNLESINI PNPAPKEKER IVAILDKFDS
LTCSIKEGLP REIELRQKQY EYYRDLLLSF PASPAGGPQS HSDEAA
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