Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_3549 |
Symbol | |
ID | 4693325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 3924747 |
End bp | 3925637 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639851305 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_998286 |
Protein GI | 121610479 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.348533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTCCAA CCAGTCAGAA GTATTTTCTA AATAGTGCGG CCGGTAGTGG CGTTCAAAAT TTAAATGCCG ATATTATAAA GCAACTTCCA ATTTTAATCA CCAAGTATTC CGAACAACAA AAAATCGCTG ACTGCCTTTC TTCCATCGAC CAACTGATCG CAGCAGAAGC TCAAAAACTC GATACGCTCA AGGCCCATAA AAAAGGGCTG ATGCAGCAGC TTTTCCCGGC TGAAGGCGAG ACTTTGCCCA AGCTGCGCTT TCCTGAGTTT AAGGATGCAA GGGTGTGGGC GTCCTGCGAT CTTGGCTCCA GAACGATCAA AGTCGGTAGT GGAATCACGC CGAATGGCGG CGATAAAAAT TACATCAATG CAGGTAGGCC ATTCATTCGT AGCCAGAACA TTGATTGGGG TGAATTACTT TTGAATAATG TTGCATTTAT TGATGATGAA ACTCATGCTT CCTTTGTTTC CACAAAAATA AATGATTCTG ACGTTTTTTT GAATATCACC GGAGCATCAA TTGGAATAAG TGCCATTGCT GATTCAAGAG TCATCGGCGG CAATGTTAAT CAGCATGTCT GCATTATTCG TCTCAAACAA AAAGAGTTGA ACCCAACGTT TCTCAATCAG TACTTGCTAT CACAATATGG CCAGCGGCAG ATTGATAGTT TTCAAGCAGG AGGAAATAGG CAAGGGCTAA ATTTTACCCA GGTGCGATCT TTTTCCATTC CGACTCCATC AAAAATGGAA GAGCAAATCA GAATTGCCGA TTGCCTATCC AGTATCGACG AATTGATCAA CGTGCAAAGT CAAAAATTCG AAGCTCTGAA AATTCATAAA AAGGGCCTGA TGCAGCAATT ATTTCCCACT GCTGAGGAGG CGATCGCATG A
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Protein sequence | MSPTSQKYFL NSAAGSGVQN LNADIIKQLP ILITKYSEQQ KIADCLSSID QLIAAEAQKL DTLKAHKKGL MQQLFPAEGE TLPKLRFPEF KDARVWASCD LGSRTIKVGS GITPNGGDKN YINAGRPFIR SQNIDWGELL LNNVAFIDDE THASFVSTKI NDSDVFLNIT GASIGISAIA DSRVIGGNVN QHVCIIRLKQ KELNPTFLNQ YLLSQYGQRQ IDSFQAGGNR QGLNFTQVRS FSIPTPSKME EQIRIADCLS SIDELINVQS QKFEALKIHK KGLMQQLFPT AEEAIA
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