Gene Veis_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3549 
Symbol 
ID4693325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3924747 
End bp3925637 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID639851305 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_998286 
Protein GI121610479 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.348533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTCCAA CCAGTCAGAA GTATTTTCTA AATAGTGCGG CCGGTAGTGG CGTTCAAAAT 
TTAAATGCCG ATATTATAAA GCAACTTCCA ATTTTAATCA CCAAGTATTC CGAACAACAA
AAAATCGCTG ACTGCCTTTC TTCCATCGAC CAACTGATCG CAGCAGAAGC TCAAAAACTC
GATACGCTCA AGGCCCATAA AAAAGGGCTG ATGCAGCAGC TTTTCCCGGC TGAAGGCGAG
ACTTTGCCCA AGCTGCGCTT TCCTGAGTTT AAGGATGCAA GGGTGTGGGC GTCCTGCGAT
CTTGGCTCCA GAACGATCAA AGTCGGTAGT GGAATCACGC CGAATGGCGG CGATAAAAAT
TACATCAATG CAGGTAGGCC ATTCATTCGT AGCCAGAACA TTGATTGGGG TGAATTACTT
TTGAATAATG TTGCATTTAT TGATGATGAA ACTCATGCTT CCTTTGTTTC CACAAAAATA
AATGATTCTG ACGTTTTTTT GAATATCACC GGAGCATCAA TTGGAATAAG TGCCATTGCT
GATTCAAGAG TCATCGGCGG CAATGTTAAT CAGCATGTCT GCATTATTCG TCTCAAACAA
AAAGAGTTGA ACCCAACGTT TCTCAATCAG TACTTGCTAT CACAATATGG CCAGCGGCAG
ATTGATAGTT TTCAAGCAGG AGGAAATAGG CAAGGGCTAA ATTTTACCCA GGTGCGATCT
TTTTCCATTC CGACTCCATC AAAAATGGAA GAGCAAATCA GAATTGCCGA TTGCCTATCC
AGTATCGACG AATTGATCAA CGTGCAAAGT CAAAAATTCG AAGCTCTGAA AATTCATAAA
AAGGGCCTGA TGCAGCAATT ATTTCCCACT GCTGAGGAGG CGATCGCATG A
 
Protein sequence
MSPTSQKYFL NSAAGSGVQN LNADIIKQLP ILITKYSEQQ KIADCLSSID QLIAAEAQKL 
DTLKAHKKGL MQQLFPAEGE TLPKLRFPEF KDARVWASCD LGSRTIKVGS GITPNGGDKN
YINAGRPFIR SQNIDWGELL LNNVAFIDDE THASFVSTKI NDSDVFLNIT GASIGISAIA
DSRVIGGNVN QHVCIIRLKQ KELNPTFLNQ YLLSQYGQRQ IDSFQAGGNR QGLNFTQVRS
FSIPTPSKME EQIRIADCLS SIDELINVQS QKFEALKIHK KGLMQQLFPT AEEAIA