Gene Dhaf_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3953 
Symbol 
ID7260973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4193726 
End bp4194967 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content39% 
IMG OID643563874 
Productrestriction modification system DNA specificity domain protein 
Protein accessionYP_002460402 
Protein GI219669967 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA AAAATACGAA GGTTCCTGAA ATAAGGTTTC GGGGGTTTAC TGACGCTTGG 
GAACAGCGAG AGTTGGGGGA GGACATCAAA TTCGTTGGAG GCGCAACTCC CTTTAAGGAA
AATCCAGAAT ACTGGAATGG TGATATTGTT TGGCTTTCTT CTCAAGAAAT CAAAGAGCGT
TTTGTTACAT CTGGAACCTA TAAAATTACA AAAAAGGCCG TGAAAGATAA CGCTACAAAG
GTCATTAAAG CTGGAACACC TTTAATTGTA ACAAGAAGTG GTATTTTAGC GAAACGATTT
CCTATAAGCA TTCCTACTGT TGATGTTGCA ATCAATCAAG ATATTAAAGC ACTTCTTTAC
GATGATGAAA GAATTGCAAC AGATTTTTTA ATTGCGGGCC TTCAAAAGAA TGAAGGATTC
ATACTGAAAC ATATAGTGAA AACAGGGACG ACTGTCCAAT CAATTAACCT CCCTGATTTT
CAAAAGTTTT TGATGGCCTA TCCCATGCTC CCCGAACAAA CCGCCATCGG CAACTTTTTC
CGCACCCTCG ACGATACTAT CACCCTTCAT AAGCGTAAGC TGGATAAGCT GAAAGAGTTG
AAGAAAGCTT ACCTGCAAAG GATGTTCCCT CAAGCTGGGA ACGATGTGCC AAAAGTGCGT
TTTGCTGGGT TTACTGAGCC GTGGGCAAGC CGAAAATTAG GTGAGGTTGC TGAGATTGTA
CGCGGAGCAA GTCCAAGACC AATACAAGAT CCCAAGTGGT TTGATGAGAA ATCAAATGTT
GGATGGTTGA GAATTTCGGA TGTATCAGTG CAAGACGGTA GGGTGCATTA TCTAGAGCAA
CATATCTCAA AAGCTGGACA AAAAAAGACA CGTGTTCTTA CTCAACCACA TCTGTTACTA
AGCATTGCTG CAAGCGTTGG AAAGCCTGTA ATTAATTACG TAAACACAGG GGTTCATGAC
GGTTTCTTGA TTTTTCAAAA TCCTAATTTT GAAATAGAAT TTATGTTTCA ATGGCTGAAG
ATGTTTGAAG AACAATGGCT GAAATATGGG CAACCAGGGA GTCAAATAAA TCTGAACTCT
GACATTGTAA AAAATCAAGA CATTTCAATA CCAACTAAAG AGGAACAAAA ACATATTGGA
AATCTATTCT TAAATCTTGA CAATCAAGTA TTTGTCCGGC AGCAAAAACT AGATCAACTT
AATCAACTTA AAAGATCATA TCTTCAAAGG ATGTTCCTAT AA
 
Protein sequence
MKDKNTKVPE IRFRGFTDAW EQRELGEDIK FVGGATPFKE NPEYWNGDIV WLSSQEIKER 
FVTSGTYKIT KKAVKDNATK VIKAGTPLIV TRSGILAKRF PISIPTVDVA INQDIKALLY
DDERIATDFL IAGLQKNEGF ILKHIVKTGT TVQSINLPDF QKFLMAYPML PEQTAIGNFF
RTLDDTITLH KRKLDKLKEL KKAYLQRMFP QAGNDVPKVR FAGFTEPWAS RKLGEVAEIV
RGASPRPIQD PKWFDEKSNV GWLRISDVSV QDGRVHYLEQ HISKAGQKKT RVLTQPHLLL
SIAASVGKPV INYVNTGVHD GFLIFQNPNF EIEFMFQWLK MFEEQWLKYG QPGSQINLNS
DIVKNQDISI PTKEEQKHIG NLFLNLDNQV FVRQQKLDQL NQLKRSYLQR MFL