Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4163 |
Symbol | |
ID | 4475904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 25917 |
End bp | 27134 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639720521 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_863679 |
Protein GI | 117676103 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.864984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0584456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG AAAAGATGGT GCCGGAGATT CGCTTTGAGG GGTTTAGTGA TGAGTGGCAA AGTTTGAGTT TGGATAAAAT TACCGATGTA TATGATGGAA CACATCAAAC GCCGGCGTAT ACAAAAAACG GGGTAATGTT TCTCTCTGCT GAGAATATAA GGTCATTAAC CTCACAAAAA TTTATTTCTG AAAAAGCTTT CAAAGAAGAG TTTAAAGTCT ATCCCCAAAA AAATGATGTT TTAATGACTC GAATAGGAGA TGTAGGAACA GCAAACGTTG TAGAAACTGA TGATGACAAA GCATATTACG TGACACTGGC GTTATTGAAG TACAAGCAAC TTAGCCCATA TTTCTTGAAA AGCTCTATTG CTTCACCGTA TGTGCAAAAA GATATTTGGC TGCGCACACT TCATATTGCA TTTCCCAAAA AGATCAATAT GAATGAAATC AAACAGGTCA ATGTCAACTG CCCAACGAAC TCGAAAGAAT CTGACAAAAT TGGTAACTAT TTTCAAAAAC TCGACAACTT AATTAACCAA TACCAACAAA AGCATGACAA GCTCAGCAAT ATCAAAAAAG CCATGCTGGA AAAAATGTTC CCCAAACAAG GCGAAACCAT CCCAGAAATT CGCTTTAAAG GGTTTAGCGG GGAGTGGGAC GAGAAAGAGC TAGGTACAGA TGTTGCTGAC ATAGTTGGTG GTGGTACACC TAGCACTTCA ATATCTGAAT TTTGGAACGG TGATATAGAT TGGTATTCGC CTACTGAAAT TGGTAGCAAT GTATATGCTG AAGGGAGTCA GAAAAAAATT ACGGCTCTAG GCCTTAATAG TTCATCAGCA AAGATACTGC CTGCTGGTAA TACGGTTCTA TTTACTAGTA GAGCTGGTAT AGGTGATATG GCTATTCTTA CAAAGCCTGG TACTACCAAT CAGGGATTTC AATCTTTTGT TGTGAAAGAA GGATTTGTAC CTTATTTCAT TTATTCCGCA GGTAAACAGA TTAAAGAATA TGCCCTTAAA CATGCGTCAG GCTCAACGTT CTTAGAAATT TCAGGTAAGC AACTTGGTCG CATGAAAATT CTTGTACCTT GCGAAACAGA ACAAACCGCT ATCGGCAACT ACTTCCAAAA GCTCGATGCG CTGATCAAAC AACACCAACA ACAAATCACC AAACTGAATA ACATCAAGCA GGCCTGCTTG AGCAAGATGT TTGTATAG
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Protein sequence | MSVEKMVPEI RFEGFSDEWQ SLSLDKITDV YDGTHQTPAY TKNGVMFLSA ENIRSLTSQK FISEKAFKEE FKVYPQKNDV LMTRIGDVGT ANVVETDDDK AYYVTLALLK YKQLSPYFLK SSIASPYVQK DIWLRTLHIA FPKKINMNEI KQVNVNCPTN SKESDKIGNY FQKLDNLINQ YQQKHDKLSN IKKAMLEKMF PKQGETIPEI RFKGFSGEWD EKELGTDVAD IVGGGTPSTS ISEFWNGDID WYSPTEIGSN VYAEGSQKKI TALGLNSSSA KILPAGNTVL FTSRAGIGDM AILTKPGTTN QGFQSFVVKE GFVPYFIYSA GKQIKEYALK HASGSTFLEI SGKQLGRMKI LVPCETEQTA IGNYFQKLDA LIKQHQQQIT KLNNIKQACL SKMFV
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