Gene Shewana3_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4163 
Symbol 
ID4475904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp25917 
End bp27134 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content39% 
IMG OID639720521 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_863679 
Protein GI117676103 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.864984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0584456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG AAAAGATGGT GCCGGAGATT CGCTTTGAGG GGTTTAGTGA TGAGTGGCAA 
AGTTTGAGTT TGGATAAAAT TACCGATGTA TATGATGGAA CACATCAAAC GCCGGCGTAT
ACAAAAAACG GGGTAATGTT TCTCTCTGCT GAGAATATAA GGTCATTAAC CTCACAAAAA
TTTATTTCTG AAAAAGCTTT CAAAGAAGAG TTTAAAGTCT ATCCCCAAAA AAATGATGTT
TTAATGACTC GAATAGGAGA TGTAGGAACA GCAAACGTTG TAGAAACTGA TGATGACAAA
GCATATTACG TGACACTGGC GTTATTGAAG TACAAGCAAC TTAGCCCATA TTTCTTGAAA
AGCTCTATTG CTTCACCGTA TGTGCAAAAA GATATTTGGC TGCGCACACT TCATATTGCA
TTTCCCAAAA AGATCAATAT GAATGAAATC AAACAGGTCA ATGTCAACTG CCCAACGAAC
TCGAAAGAAT CTGACAAAAT TGGTAACTAT TTTCAAAAAC TCGACAACTT AATTAACCAA
TACCAACAAA AGCATGACAA GCTCAGCAAT ATCAAAAAAG CCATGCTGGA AAAAATGTTC
CCCAAACAAG GCGAAACCAT CCCAGAAATT CGCTTTAAAG GGTTTAGCGG GGAGTGGGAC
GAGAAAGAGC TAGGTACAGA TGTTGCTGAC ATAGTTGGTG GTGGTACACC TAGCACTTCA
ATATCTGAAT TTTGGAACGG TGATATAGAT TGGTATTCGC CTACTGAAAT TGGTAGCAAT
GTATATGCTG AAGGGAGTCA GAAAAAAATT ACGGCTCTAG GCCTTAATAG TTCATCAGCA
AAGATACTGC CTGCTGGTAA TACGGTTCTA TTTACTAGTA GAGCTGGTAT AGGTGATATG
GCTATTCTTA CAAAGCCTGG TACTACCAAT CAGGGATTTC AATCTTTTGT TGTGAAAGAA
GGATTTGTAC CTTATTTCAT TTATTCCGCA GGTAAACAGA TTAAAGAATA TGCCCTTAAA
CATGCGTCAG GCTCAACGTT CTTAGAAATT TCAGGTAAGC AACTTGGTCG CATGAAAATT
CTTGTACCTT GCGAAACAGA ACAAACCGCT ATCGGCAACT ACTTCCAAAA GCTCGATGCG
CTGATCAAAC AACACCAACA ACAAATCACC AAACTGAATA ACATCAAGCA GGCCTGCTTG
AGCAAGATGT TTGTATAG
 
Protein sequence
MSVEKMVPEI RFEGFSDEWQ SLSLDKITDV YDGTHQTPAY TKNGVMFLSA ENIRSLTSQK 
FISEKAFKEE FKVYPQKNDV LMTRIGDVGT ANVVETDDDK AYYVTLALLK YKQLSPYFLK
SSIASPYVQK DIWLRTLHIA FPKKINMNEI KQVNVNCPTN SKESDKIGNY FQKLDNLINQ
YQQKHDKLSN IKKAMLEKMF PKQGETIPEI RFKGFSGEWD EKELGTDVAD IVGGGTPSTS
ISEFWNGDID WYSPTEIGSN VYAEGSQKKI TALGLNSSSA KILPAGNTVL FTSRAGIGDM
AILTKPGTTN QGFQSFVVKE GFVPYFIYSA GKQIKEYALK HASGSTFLEI SGKQLGRMKI
LVPCETEQTA IGNYFQKLDA LIKQHQQQIT KLNNIKQACL SKMFV