| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1960 |
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| Symbol | hsdS3 |
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| ID | 6363795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2338749 |
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| End bp | 2339990 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642681169 |
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| Product | restriction endonuclease S subunit |
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| Protein accession | YP_001955903 |
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| Protein GI | 189440822 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.323459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AGGCGAAAGT TCCTGCGATT CGCTTTGCTG GTTTTACTGA CCCTTGGGAA
CAGCGTAAGT TGGGCGAGAT TGCCGATAAG GTGACAGAAA AAAATCTTGA TGGAAACATC
ACCGAGGTTC TTACCAACTC TGCAGAATAC GGTGTAATTA ATCAAACCGA GTTCTTCGAC
CACGCTGTCG CCAAGGAATC CAACATTGCT GGTTATTATG TCATTGCTCC AGGGGATTTC
GTGTACAACC CTCGCATCTC CGCAACAGCG CCTGTTGGCC CAATCCGTAG GAATACGTTG
GGAATACACG GAGTTATGTC TCCTCTCTAC ACTGTATTCA GGCTTACAGA TGCAGTCGAT
GGAACTTATC TCAGCCACTT CTTCAAGACA AATGGCTGGC ATGGTTTCAT GAAGCTGGAA
GGTAATTCGG GAGCCAGATC AGATAGGTTC TCAATCGGTG ATGCGACATT CTTTGAAATG
CCAATCCCAG TTCCATCTTC AAGTGAACAA TATGCTATAG GCTCCTTCTT TTCCCGTCTC
GACGACCTCA TCACCCTTCA TCAGCGTAAG TATGACAAGC TCGTCATCTT CAAAAAATCG
ATGCTTGAAA AAATGTTCCC GAAGGATGGC GAATCTGTAC CCGAAATTCG CTTTGCTGGT
TTTACTGACC CTTGGGAACA GCGTAAGTTG GGCGAGATTG CCGATAAGGT GACAGCAAAA
AATCTTGATG GAAACATCAC CGAGGTTCTT ACCAACTCTG CAGAATACGG TGTAATTAAT
CAAACCGAGT TCTTCGACCA CGCTGTCGCC AAGGAATCCA ACATTGCTGG TTATTATGTC
ATTGCTCCAG GGGATTTCGT GTACAACCCT CGCATCTCCG CAACAGCGCC TGTTGGCCCA
ATCCGTAGGA ATACGTTGGG AATACACGGA GTTATGTCTC CTCTCTACAC TGTATTCAGG
CTTACAGATG CAGTCGATGG AACTTATCTC AGCCACTTCT TCAAGACAAA TGGCTGGCAT
GGTTTCATGA AGCTGGAAGG TAATTCGGGA GCCAGATCAG ATAGGTTCTC AATCGGTGAT
GCGACATTCT TTGAAATGCC AATCCCAGTT CCATCTTCAA GTGAACAACA TGCTATAGGC
TCCTTCTTTT CCCGTCTTGA CAACCTCATC ACTCTTCATC AGCGTAAGTT GGAATTGCTG
CAGGATATCA AGAAATCTTT GCTTGACAAG ATGTTTGTGT GA
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| Protein sequence | MTEQAKVPAI RFAGFTDPWE QRKLGEIADK VTEKNLDGNI TEVLTNSAEY GVINQTEFFD
HAVAKESNIA GYYVIAPGDF VYNPRISATA PVGPIRRNTL GIHGVMSPLY TVFRLTDAVD
GTYLSHFFKT NGWHGFMKLE GNSGARSDRF SIGDATFFEM PIPVPSSSEQ YAIGSFFSRL
DDLITLHQRK YDKLVIFKKS MLEKMFPKDG ESVPEIRFAG FTDPWEQRKL GEIADKVTAK
NLDGNITEVL TNSAEYGVIN QTEFFDHAVA KESNIAGYYV IAPGDFVYNP RISATAPVGP
IRRNTLGIHG VMSPLYTVFR LTDAVDGTYL SHFFKTNGWH GFMKLEGNSG ARSDRFSIGD
ATFFEMPIPV PSSSEQHAIG SFFSRLDNLI TLHQRKLELL QDIKKSLLDK MFV
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