63 homologs were found in PanDaTox collection
for query gene Amuc_1914 on replicon NC_010655
Organism: Akkermansia muciniphila ATCC BAA-835



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010655  Amuc_1914  restriction modification system DNA specificity domain  100 
 
 
386 aa  800    Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  hitchhiker  0.00381757 
 
 
-
 
NC_010816  BLD_1960  restriction endonuclease S subunit  32.79 
 
 
413 aa  168  2e-40  Bifidobacterium longum DJO10A  Bacteria  normal  0.323459  n/a   
 
 
-
 
NC_009783  VIBHAR_01116  hypothetical protein  29.81 
 
 
400 aa  135  9.999999999999999e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008573  Shewana3_4163  restriction modification system DNA specificity subunit  27.51 
 
 
405 aa  134  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  0.864984  normal  0.0584456 
 
 
-
 
NC_009832  Spro_4083  restriction modification system DNA specificity subunit  35.21 
 
 
409 aa  120  3e-26  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3673  restriction modification system DNA specificity subunit  34.66 
 
 
410 aa  120  4.9999999999999996e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009036  Sbal_4462  restriction modification system DNA specificity subunit  27.17 
 
 
349 aa  114  2.0000000000000002e-24  Shewanella baltica OS155  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_2724  restriction modification system DNA specificity domain protein  26.6 
 
 
409 aa  114  4.0000000000000004e-24  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3717  restriction modification system DNA specificity subunit  31.58 
 
 
427 aa  106  7e-22  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2471  type I restriction-modification system S subunit  31.27 
 
 
381 aa  102  9e-21  Staphylococcus epidermidis RP62A  Bacteria  decreased coverage  0.0091078  n/a   
 
 
-
 
NC_009708  YpsIP31758_3537  putative type I restriction-modification system, S subunit  29.54 
 
 
419 aa  98.2  2e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2722  restriction modification system DNA specificity domain protein  28.47 
 
 
385 aa  93.2  8e-18  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011061  Paes_2397  restriction modification system DNA specificity domain  26.43 
 
 
417 aa  87.8  3e-16  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000238697  n/a   
 
 
-
 
NC_011830  Dhaf_3953  restriction modification system DNA specificity domain protein  29.8 
 
 
413 aa  85.9  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3951  restriction modification system DNA specificity domain protein  26.13 
 
 
406 aa  84.7  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1176  restriction modification system DNA specificity subunit  32.94 
 
 
408 aa  82  0.00000000000002  Methylobacillus flagellatus KT  Bacteria  normal  0.882603  normal 
 
 
-
 
NC_008322  Shewmr7_2862  restriction modification system DNA specificity subunit  35.29 
 
 
589 aa  80.1  0.00000000000007  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0750  restriction endonuclease S subunit  23.24 
 
 
387 aa  76.3  0.0000000000008  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05614  type I restriction-modification system S subunit  23.46 
 
 
432 aa  73.9  0.000000000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008786  Veis_1566  restriction modification system DNA specificity subunit  28.57 
 
 
403 aa  73.2  0.000000000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0293394  unclonable  0.0000192379 
 
 
-
 
NC_009438  Sputcn32_0160  restriction modification system DNA specificity subunit  22.62 
 
 
399 aa  73.2  0.000000000008  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_03130  hypothetical protein  29.03 
 
 
208 aa  72.4  0.00000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.0551237  hitchhiker  0.00000000000000986658 
 
 
-
 
NC_011060  Ppha_0745  restriction modification system DNA specificity domain  27.55 
 
 
411 aa  70.1  0.00000000006  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.189202  n/a   
 
 
-
 
NC_008576  Mmc1_0132  restriction modification system DNA specificity subunit  21.83 
 
 
427 aa  68.9  0.0000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.47299 
 
 
-
 
NC_007484  Noc_0446  restriction modification system DNA specificity subunit  27.92 
 
 
434 aa  67.4  0.0000000004  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.0000807768  n/a   
 
 
-
 
NC_011206  Lferr_2009  restriction modification system DNA specificity domain  23.74 
 
 
423 aa  67  0.0000000005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.999718  normal  0.91224 
 
 
-
 
NC_011761  AFE_2378  type I restriction-modification system, S subunit  23.74 
 
 
383 aa  67  0.0000000006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0448  restriction modification system DNA specificity domain  23.35 
 
 
435 aa  65.1  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00000159098 
 
 
-
 
NC_009487  SaurJH9_1859  restriction modification system DNA specificity subunit  23.61 
 
 
409 aa  64.7  0.000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.777891  n/a   
 
 
-
 
NC_009632  SaurJH1_1894  restriction modification system DNA specificity subunit  23.61 
 
 
409 aa  64.7  0.000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.850685  n/a   
 
 
-
 
NC_007947  Mfla_1216  restriction modification system DNA specificity subunit  21.79 
 
 
427 aa  64.7  0.000000003  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1433  restriction modification system DNA specificity subunit  29.41 
 
 
372 aa  63.5  0.000000006  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1954  restriction endonuclease S subunit  32.7 
 
 
216 aa  60.8  0.00000004  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3549  restriction modification system DNA specificity subunit  35.48 
 
 
296 aa  59.3  0.0000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.348533  normal 
 
 
-
 
NC_007954  Sden_1237  restriction modification system DNA specificity subunit  29.27 
 
 
633 aa  58.5  0.0000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4240  Restriction endonuclease S subunits-like protein  28.77 
 
 
436 aa  58.2  0.0000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5244  restriction modification system DNA specificity domain  22.86 
 
 
422 aa  56.6  0.0000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1087  restriction modification system DNA specificity subunit  31.36 
 
 
437 aa  56.6  0.0000008  Opitutus terrae PB90-1  Bacteria  normal  0.0762586  normal 
 
 
-
 
NC_008530  LGAS_0901  restriction endonuclease S subunit  30.71 
 
 
363 aa  55.5  0.000001  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000124976  hitchhiker  0.000000573897 
 
 
-
 
NC_008309  HS_0556  type I restriction enzyme, specificity subunit  26.87 
 
 
183 aa  55.8  0.000001  Haemophilus somnus 129PT  Bacteria  normal  0.0239636  n/a   
 
 
-
 
NC_013216  Dtox_2621  restriction modification system DNA specificity domain protein  25 
 
 
400 aa  54.3  0.000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0382  type I restriction-modification system, S subunit  21.08 
 
 
439 aa  53.9  0.000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_5008  Restriction endonuclease S subunits-like protein  22.54 
 
 
465 aa  52.4  0.00001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.441656 
 
 
-
 
NC_009943  Dole_0249  restriction modification system DNA specificity subunit  24.7 
 
 
393 aa  52.4  0.00001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0854  restriction modification system DNA specificity subunit  27.45 
 
 
595 aa  52  0.00002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.221182  normal  0.0643125 
 
 
-
 
NC_011206  Lferr_0835  restriction modification system DNA specificity domain  26.04 
 
 
563 aa  50.8  0.00003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.835919  normal  0.945638 
 
 
-
 
NC_011761  AFE_0686  type I restriction-modification system, S subunit, putative  26.04 
 
 
561 aa  50.8  0.00003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.840975  n/a   
 
 
-
 
NC_009939  Dgeo_3109  restriction modification system DNA specificity subunit  21.32 
 
 
426 aa  49.3  0.0001  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0842  type I restriction-modification enzyme, S subunit, putative  24.88 
 
 
476 aa  49.3  0.0001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1842  restriction modification system DNA specificity subunit  26.44 
 
 
391 aa  49.3  0.0001  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0615  restriction modification system DNA specificity subunit  23.04 
 
 
417 aa  47  0.0005  Methanococcus maripaludis C5  Archaea  normal  0.0545068  n/a   
 
 
-
 
NC_007575  Suden_0944  restriction modification system DNA specificity subunit  29.45 
 
 
420 aa  47.4  0.0005  Sulfurimonas denitrificans DSM 1251  Bacteria  hitchhiker  0.00000962716  n/a   
 
 
-
 
NC_012918  GM21_0429  restriction modification system DNA specificity domain protein  21.92 
 
 
404 aa  47  0.0006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007514  Cag_0808  specificity determinant HsdS-like  24.71 
 
 
363 aa  46.6  0.0008  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.361917  n/a   
 
 
-
 
NC_009632  SaurJH1_0467  restriction modification system DNA specificity subunit  24.17 
 
 
403 aa  45.8  0.001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0455  restriction modification system DNA specificity subunit  24.17 
 
 
403 aa  45.8  0.001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  21.66 
 
 
425 aa  45.1  0.002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_1492  restriction modification system DNA specificity subunit  24.06 
 
 
479 aa  45.1  0.002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008573  Shewana3_4241  restriction modification system DNA specificity subunit  21.43 
 
 
411 aa  44.7  0.003  Shewanella sp. ANA-3  Bacteria  normal  0.491612  hitchhiker  0.00127278 
 
 
-
 
NC_012039  Cla_0347  type I restriction-modification system, S subunit  26.02 
 
 
390 aa  43.5  0.007  Campylobacter lari RM2100  Bacteria  hitchhiker  0.00000269296  n/a   
 
 
-
 
NC_002967  TDE0368  type I restriction-modification system, S subunit, putative  21.78 
 
 
562 aa  43.5  0.007  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2904  restriction modification system DNA specificity subunit  20.6 
 
 
425 aa  43.1  0.008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0334  restriction modification system DNA specificity domain  20.89 
 
 
430 aa  42.7  0.01  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.284396 
 
 
-
 
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