| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1237 |
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| Symbol | |
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| ID | 4017286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1442046 |
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| End bp | 1443947 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637955233 |
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| Product | restriction modification system DNA specificity subunit |
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| Protein accession | YP_562246 |
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| Protein GI | 91792595 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATT TATCAACACC TACCAACGAC GGTCAATCAG AGCAAGCAGC AGAAAGCTTA
ATCACCAACC ATATTGATAT TTGGACGACC GCCATTGAGC GAAAATCCTC TGCAGGGCGC
GGGTCATCAA ATAAGTTTTC CTTGTATGGC ATTAAAAAAC TGCGTGAGCT GATTTTAGAG
CTCGCCGTGC GCGGTAAGTT AGTACCGCAG GCCAGCTTTG ATGAGATAAA TAGTCCAGAT
TATGAGCCAG CGTCAGTATT ACTCGAGCGT ATTGCCGCTG TAAAAGCCCA GTTGGTGAAA
GAGGGCAAGC TTAAAAAACA AAAGCCTTTG CCTGAGATTG GTGACAATGA AAAGCCGTTT
GAATTACCAA ATGGATGGAA GTGGAGTCGA CTCGGTGATT TTGTTTCAAT CATAAGAGGA
ATAACATTCC CTTCAAGTGA AAAGCACAGA GAGTTAGCGC CATCTAGAGT AGCTTGCATT
AGGACTACAA ATGTTCAAGA TAGTCTTGAA TGGGATGATT TACTGTATGT TGATAGGAGT
TATGTTAAGC GTGAAGAACA ATATCTAAAG TTAGGGGATA TTGTTATGTC TATGGCAAAC
AGTAGAGAGT TAGTCGGAAA AGTATCTTTT ATAACACATA TTCCTGTCGG TGAATCATCA
TTTGGTGGCT TCTTAAGTGT AATTAGGCCA TATCAATTTG ACGCTAGCTT TTTAATGTCA
GTCCTGAGAG CTCCTTTGAC AAAAAATGAA TTAATTGGCA GTGCAAGTCA AACTACAAAT
ATTGCTAATA TTTCCTTAGA AAAGTTAAAT CCTCTAGTTA TTGCTGTACC TCCACTCGAA
GAACAACACC GTATCGTCGC TAAAGTTGAT GAGTTAATGA GCTTGTGTGA TGCCCTCGAA
GCGCAAACCG AAGCGAGCAT TGCGGCACAT CAAACCTTAG TAGAAACCTT GCTGAATGCA
CTGTTACTGC CTAACACTTC TCAGCCAGCA GATAGCCAAT CAGCCAGCCT CGAGCCTGCA
CTTAATGATA GTTTAATAGA CAACTGGGAG CGTGTCGCCG AACACTTCGA CACGCTATTC
ACCACCGCAG CCAGCATCGA CACCCTAAAA CAAACCATCC TCCAACTCGC CGTCATGGGT
AAGTTGGTGC CACAAGCCAG CTTAGCTGAA AGAAACAGTC CAGATTATGA ACCCGCCGCC
AAGCTACTGA AGCGGATCAA AGCTGAAAAA GCTCAACTGA TTAAAGACGG TAAAATAAAA
AAACAGAAAC CACTGCCCGA CATCACAGAT GAAGAAAAAC CGTTTGAACT GCCTGAATCT
GGTGAGTGGG TGAGACTTGG TGATTTATGT ACGCTTGTAA CAAGCGGGTC TAGAGGTTGG
AAAACATATT ACGCTGAAAG TGGCGCTACA TTTATTCGTT CTCAAGATAT CAAATACGAT
AGGGTAGAAT TTGACGATAA GGCATATGTA AAGCTACCTG AAACTACTGA AGGTAAAAGA
ACTAAAGTTG ATGTTGGTAA TCTACTGATG ACTATCACTG GTGCAAATGT TGCCAAAACT
GCAATAGTAG AGATTGAACT TGATGAGGCT TATGTTAGTC AGCATGTAGC ACTAATAAAA
CTGATTAACA GTGTTATGAA TAAGTATATT CATCTTTGGT TAACCGGAGC ATTTGGAGGT
CGAGGATTAT TATTAGAATG TAGCTATGGC GCAAAGCCAG GACTTAATCT TCAAAATATT
AACGAGTTGA TTATACCTAT ACCCCCACTA GAAGAACAAC ATCGCATCGT AGCCAAAGTC
GAAGAGCTAA TGGCACTCTG CGACAAACTT AAAGCCCGTT TAAGTGACGC CCAAACAACT
CAACTCCACC TCACCGACGC CATCGTCGAA CAGGCTGTGT AA
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| Protein sequence | MADLSTPTND GQSEQAAESL ITNHIDIWTT AIERKSSAGR GSSNKFSLYG IKKLRELILE
LAVRGKLVPQ ASFDEINSPD YEPASVLLER IAAVKAQLVK EGKLKKQKPL PEIGDNEKPF
ELPNGWKWSR LGDFVSIIRG ITFPSSEKHR ELAPSRVACI RTTNVQDSLE WDDLLYVDRS
YVKREEQYLK LGDIVMSMAN SRELVGKVSF ITHIPVGESS FGGFLSVIRP YQFDASFLMS
VLRAPLTKNE LIGSASQTTN IANISLEKLN PLVIAVPPLE EQHRIVAKVD ELMSLCDALE
AQTEASIAAH QTLVETLLNA LLLPNTSQPA DSQSASLEPA LNDSLIDNWE RVAEHFDTLF
TTAASIDTLK QTILQLAVMG KLVPQASLAE RNSPDYEPAA KLLKRIKAEK AQLIKDGKIK
KQKPLPDITD EEKPFELPES GEWVRLGDLC TLVTSGSRGW KTYYAESGAT FIRSQDIKYD
RVEFDDKAYV KLPETTEGKR TKVDVGNLLM TITGANVAKT AIVEIELDEA YVSQHVALIK
LINSVMNKYI HLWLTGAFGG RGLLLECSYG AKPGLNLQNI NELIIPIPPL EEQHRIVAKV
EELMALCDKL KARLSDAQTT QLHLTDAIVE QAV
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