Gene BLD_1954 details

Gene Information

• Locus tag: BLD_1954
• Symbol: hsdS1
• ID: 6363789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 2331690
• End bp: 2332340
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642681163
• Product: restriction endonuclease S subunit
• Protein accession: YP_001955897
• Protein GI: 189440816

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTGTA AGGTGTCGCT CCAATCGTCG TTAGCCACAC TTATCGCGAT AAGTGTGGCT 
AACAGCGGAA ATGGTAGTGT CCAAGTCGCC GGTAGATGTA TTGCGTATGT TCGGCCAGCC 
ACTCGTATCC CGTCTACCCT GCTTCATCTA GTGCCGATGC CCGCTTGGGA ACAGCGTAAG 
TTGGGCGAAT TGTTTGATTA CGAACAGCCT CAGCCATATA TTGTGAGGGG AACTGAGTAT 
GACGATTCCT TCCCCACACC AGTTTTGACT GCCGGTCAAA GTTTCGTTCT GGGATACACA 
AATGAGAAGC AGGGGATTAA GATGGCGAGC CCTGAGCATC CCGTTATCAT TTTTGATGAT 
TTTACGACTT CGAGCCATTT TGTTGATTTC CCCTTTAAAG TCAAGAGTTC TGCTATAAAA 
CTGCTGACTC TTCGCGACAA AAACGAAGAC ATTCATTTTG CATACCAGGT ACTGCAAAAT 
ATTGCCTACA CGCCTGTGAG CCATGAGAGG CACTGGATTT CTAAATTCGC GACTTTCGCA 
ACTCTCATGC CGGAGTGTAA ATCCGAGATG CAGGCAATCG GGCATTTCAT GTCAAACCTT 
GATGGCCTCA TCACCCTTCA TCAGCGTAAG CGTCTGTGGT TTGCTAAATA A 

 

Protein sequence

MACKVSLQSS LATLIAISVA NSGNGSVQVA GRCIAYVRPA TRIPSTLLHL VPMPAWEQRK 
LGELFDYEQP QPYIVRGTEY DDSFPTPVLT AGQSFVLGYT NEKQGIKMAS PEHPVIIFDD 
FTTSSHFVDF PFKVKSSAIK LLTLRDKNED IHFAYQVLQN IAYTPVSHER HWISKFATFA 
TLMPECKSEM QAIGHFMSNL DGLITLHQRK RLWFAK