Gene VIBHAR_05614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05614 
Symbol 
ID5558812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp817716 
End bp819014 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content43% 
IMG OID640910090 
Producttype I restriction-modification system S subunit 
Protein accessionYP_001447744 
Protein GI156976838 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA AGAAATGTTA TCCATTACAG CGTTTAGGTG AGCTAGCTTC GGGAAATCGG 
GGAGTTTCTT ACAAGCCCGA GAATCTAAAA GCAGCGATTG ATGATAAGTC AGTGGTTTTT
CTTCGTTCCA ACAATATTCA AAGTGGAACA TTGAATTTTG AAAATGTGCA GATTGTGCCT
GATTCACTTG TTTCTGATAG CCAGATATTG AAGAAAGGCG ATATTGCTGT TTGTATGTCA
AATGGTAGTC GTCAACTGGT TGGAAAAAGT GGAATGCTTC AACATGAGGT CGAGTATCCT
CTAACGGTTG GAGCGTTTTG TTCTGTATTT CGTTGCCAAA ATGAAGATGA TTCAGAATAC
GTTCGTTACC TTTTTCAATC ACAAGCCTAT CAACATGGAA TTGATGTTAC GCTTGCTGGT
AGTGCAATAA ATAATTTAAA GAACTCTGAT GTTGAGGCTA TTGAAGTACC GACGGCACCC
AAAGCATTGC GTAAGAAAAT TGCTGAAATA TTGTCAACCA TCGACAACCA AATCGACGCC
ACTCAAGCCC TAATCGACAA ATACACTGCT ATCAAACAAG GCATGATGGC GGATTTGTTT
AGCCGAGGTA TCGACCCGGA AACTAAAGCA CTTCGCCCAA CGCTTGAAGA AGCGCCAGAG
CTTTATCATA AGACCCCGCT GGGGATGTTG CCTAAGGGGT GGGATGTAAA AACACTTGGA
GATATATCAG AAAAGATCAC AAGTGGCTCT AGAGACTGGG CGAAGTTTTA CTCTCCAGAG
GGCGATCTTT TTGTTCGGAT CAGTAATCTT ACTCGCGAGC ATGTGAACTT TCGTTGGGAT
TCCGTTAAAC ATGTCAATAT CGGCGGTGGC TCTGAGGGGG AAAGAACACA GCTACAGCCG
GGTGACATTC TCGTTTCGAT TACTGCAGAT TTAGGTATTG TTGGTGTTGT CCCTGAGAAT
ATGGGGAGAG CCTATATTAA CCAACATACG GCACTAATTC GCTTATCCAC TTATGGTGAA
AATGCGAGAT TTATTGGTAA TTACTTGTCA TCTCGATGTG GGCAGGAGCA GTTTGAGAAA
AACAATGATT CAGGTGCAAA AGCTGGTATC AATTTACCTA CAATCGCCTC GCTTCGCTGT
CCAATCCCCG AGGAAAAAGA GCAATTATTA ATAGCATCAA AAATCGATGC TTTAGACGAG
GTTATTGCTG ACCTCAAAAG GGAAAAGTCG AAAAGCCTTT CACTCAAGCA AGGCTTAATG
CAGGACCTCT TAACAGGCAA AGTCTCCGTA CCCGCATAA
 
Protein sequence
MNEKKCYPLQ RLGELASGNR GVSYKPENLK AAIDDKSVVF LRSNNIQSGT LNFENVQIVP 
DSLVSDSQIL KKGDIAVCMS NGSRQLVGKS GMLQHEVEYP LTVGAFCSVF RCQNEDDSEY
VRYLFQSQAY QHGIDVTLAG SAINNLKNSD VEAIEVPTAP KALRKKIAEI LSTIDNQIDA
TQALIDKYTA IKQGMMADLF SRGIDPETKA LRPTLEEAPE LYHKTPLGML PKGWDVKTLG
DISEKITSGS RDWAKFYSPE GDLFVRISNL TREHVNFRWD SVKHVNIGGG SEGERTQLQP
GDILVSITAD LGIVGVVPEN MGRAYINQHT ALIRLSTYGE NARFIGNYLS SRCGQEQFEK
NNDSGAKAGI NLPTIASLRC PIPEEKEQLL IASKIDALDE VIADLKREKS KSLSLKQGLM
QDLLTGKVSV PA