Gene SERP2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP2471 
Symbol 
ID3241586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp2523971 
End bp2525116 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content27% 
IMG OID637169145 
Producttype I restriction-modification system S subunit 
Protein accessionYP_190014 
Protein GI57865902 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0091078 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC ACACAAATAC TCCAGAATTA AGATTTCCAG AATTTAGAGA AGAATGGAAT 
ATTGAACAAG TTTCTGATTT TTTGATAGAA AGTAAAATAG TAGGTCATAA AGGTAACCAA
GCTAAAAAAT TAACGGTTAA GCTTTGGGGA AAAGGTATAG TGGAGAAAGA AAGTATATTT
AAAGGCAGTA GTAATACTCA ATATTATATA CGAAAAGCTG GCCAACTAAT GTATGGAAAG
TTAGATTTTC TAAATTGTGC CTTTGGTCTA GTTCCAACTG AATTGAACAA TTTTGAAAGT
ACCATTGATT CACCAAGTTT CGACTTTATA AAAGGTGACA AAAAATTTTT ATTAGAAAGA
ATTAAAATGA AATCTTTTTA TAAAAAATAT GGAGATTTAG CTAATGGCAG TAGAAAGGCT
AAAAGAATTA ATCAAAATAC TTTTTTATCT ATGCCATTAT ATGCACCTAC TATTAACGAA
CAAAAAAAAA TTGGTGATTT CTTTAGCAAA CTCGACCGCC AGATTGAGTT AGAAGAGAAG
AAATTAGAAT TGTTAGAGCA ACAAAAGCGT GGATATATGC AAAAGATTTT CTCACAACAA
CTTCGCTTTA AAGATGAAAA AGGGAATGAT TATCCAAAGT GGATTTTTAA AAAATTCGAA
GAAATATTTA AAGTTGTCCC ATCAAAAAAA TATCAAATAA AATCTTCTGA AATTGAAGAT
AACGCAAGTA TTCCAGTAAT TGATCAAGGG CAAAATTTGA TTTTAGGTTT TTCAAATAAT
AAAGAAAAAG TATTCAATGA TTTTAAAAAT GTAATTATTT ATGGAGATCA TACCACAGTT
ATAAAGAGAA GTGATAAGCC TTTTATAATT GGAGGAGATG GAGTTAAGTT GTTAACTTCT
AAAGTAGACA GTGATATATC ATATTTATAC AATGCTCTAC AATATTTTAA TGTGAAATCT
GAAGGATATA AGCGACACTT TAGTATACTT AAGAATAAAG ATTTTTACAT ATCAACTTCT
ATCGAAGAAC AAAAAAGAAT AGCTAATATT TTTAATAAAT TAGATAAATA TATAGAAAAA
CAATTTGCTA AAGTTGAACT ATTAAAACAA CGCAAACAAG GATTACTACA GAAAATGTTT
GTGTAA
 
Protein sequence
MTEHTNTPEL RFPEFREEWN IEQVSDFLIE SKIVGHKGNQ AKKLTVKLWG KGIVEKESIF 
KGSSNTQYYI RKAGQLMYGK LDFLNCAFGL VPTELNNFES TIDSPSFDFI KGDKKFLLER
IKMKSFYKKY GDLANGSRKA KRINQNTFLS MPLYAPTINE QKKIGDFFSK LDRQIELEEK
KLELLEQQKR GYMQKIFSQQ LRFKDEKGND YPKWIFKKFE EIFKVVPSKK YQIKSSEIED
NASIPVIDQG QNLILGFSNN KEKVFNDFKN VIIYGDHTTV IKRSDKPFII GGDGVKLLTS
KVDSDISYLY NALQYFNVKS EGYKRHFSIL KNKDFYISTS IEEQKRIANI FNKLDKYIEK
QFAKVELLKQ RKQGLLQKMF V