Gene Sputcn32_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0160 
Symbol 
ID5078986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp187701 
End bp188900 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content39% 
IMG OID640497280 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001181695 
Protein GI146291271 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCTA ATGGATGGAA AGACGGTCGA GTCAGAGATT TAATTAAATC GTTAAATGCT 
GGAGTTTCTG TTAACTCTGA GGACGATGGC AATCTAAATT CTTCATACAA AATATTAAAA
ACAAGCTGTG TTTCAAAGGG GGTTTTTGAT CCAAATGAAA CTAAATCAGT TGTTGAAGAG
ATCGAAATTT CAAGATTAAA AGAGCCTGTA TTAGGTGACT CAATAATAAT CAGCCGAATG
AATACTCCTG CATTGGTAGG CGCTAATGGC TATATCGAAA ATGGAATCGA TAATACCTAC
CTACCAGATA GACTTTGGCA AGCCAAACCT AAAAGTAATG ATGTCAATAT GAAATGGCTG
GGTTATTGGT TTGCTAGTAG CCACACCAGA TATACTTTAA GCTCAACGGC TACAGGTACT
AGTGGTAGTA TGAAAAATAT TACCAAATCT GATGTATTGA ATATCAAAAT TGATATTCCC
CCACTCCCGG AACAACGCAA AATCGCCAAA ATCCTATCCA CTTGGGATAA AGCGATTAGT
ACCACCGAGC GCCTAATCGA CAACAGCAAA CAGCAGAAAA AAGCCCTCAT GCAACAACTG
CTCACTGCCA AAAAGCGCTT ACTTGATGAT TCAGGTAAAC CGTTTGAGGG GGAGTGGACA
AAAGTTGAAC TTGGTAAGTT GCTTGATTAC AAACAGCCAA CACCTTACTT GGTTAAATCA
ACCGATTACT CAAATGAGTA TTCAATACCA GTCTTGACAG CAGGAAAGAC ATTTATACTT
GGATATTCCA ATGAAAATTT TGGTATTTTC GAAGAGGAGC TACCAGCGAT AATTTTCGAT
GACTTCACGA CAGCTAGCAA ATTTGTAGAT TTTCCATTCA AAGCTAAGTC TAGTGCAATG
AAAATACTGG TTGCAAAGCA AGGCGTTTCT ATAAAGTTCG TTTATGAAGC CATGCAAGTG
CTCAATTATC CCGTTGGTGG TCACCAACGA CATTGGATTT CAATATTCGC TAACCTAGTC
ATTGGGCTAC CTTCGCTATT AGAACAGCAA AAAATAGCCT CAGTGCTAAC TAACGCAGAC
AAAGAAATTG AACTATTAGA ACAGCAGCTT GCTGATCTCA AACAAGAGAA AAAAGCGCTA
ATGCAGCAAC TGTTAACAGG CAAGCGCAGA GTGAAAATTG ATGATAAGGA AGTCGCATAA
 
Protein sequence
MVPNGWKDGR VRDLIKSLNA GVSVNSEDDG NLNSSYKILK TSCVSKGVFD PNETKSVVEE 
IEISRLKEPV LGDSIIISRM NTPALVGANG YIENGIDNTY LPDRLWQAKP KSNDVNMKWL
GYWFASSHTR YTLSSTATGT SGSMKNITKS DVLNIKIDIP PLPEQRKIAK ILSTWDKAIS
TTERLIDNSK QQKKALMQQL LTAKKRLLDD SGKPFEGEWT KVELGKLLDY KQPTPYLVKS
TDYSNEYSIP VLTAGKTFIL GYSNENFGIF EEELPAIIFD DFTTASKFVD FPFKAKSSAM
KILVAKQGVS IKFVYEAMQV LNYPVGGHQR HWISIFANLV IGLPSLLEQQ KIASVLTNAD
KEIELLEQQL ADLKQEKKAL MQQLLTGKRR VKIDDKEVA