Gene Shewana3_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4241 
Symbol 
ID4475965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp114945 
End bp116180 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content41% 
IMG OID639720598 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_863756 
Protein GI117676180 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.491612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00127278 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTGTA GTTGGCCTAC TGTAACTTTA GATGAGTGTG CATCATTTCA AGAAGGGTAT 
GTAAATCCTA CTCAGAAAAA AGAACATTAC TTTGATGGGC CTGTAAAATG GCTTCGTGCT
GTTGACTTAA ACAACGGCTC GATACGCAAT ACCTCTAGGA CGTTGTCTGA AGAAGGGTTC
AAAAGTGCAG GAAAAAGTGC ATTACTATTT GAACCCGGAA CTTTAGCCAT AAGCAAGTCA
GGTACTATTG GTCGTATTGG AATTCTCGAA GACTACATGT GTGGTAACCG CGCAGTTATA
AACATCAAAG TTGATAAAGA TAAGTGTGAC AATTTGTACA TTTTTTATGT ACTTTTGATG
AGTAGAAGAG TTATAGAAAC GCTTGCTGTT GGTAGTGTTC AAAAAAACCT ATATACGTCT
GCGTTAGGCT CCCTAGAGTT AAGACTTCCG CCTTTGCAAG TTCAAGCAGC TATCGCGAAG
CAGTTGTCTG ATTTAGATAA AAAAATCGAT TTAAACACAC AAACCAATCA AACCTTAGAG
GAAATGGCAC AGGCCATATT CAAGTCATGG TTCGTTGATT TTGATCCAGT CAAAGCCAAA
ATGAATGGCA AGCAACCAGA GGGTATGGAT GCGGCTACTG CCTCGCTATT CCCTGAAAAG
CTAGTTGAGT CTGAGTTGGG TTTGATTCCA GAAGGTTGGG ATGCGGTTCA AGTTGGTGAC
ATCGTACAAC GATTAAAACC AAAGAAACGC TATACCAAGA AGCAAGTTGA GCCTTATGGT
AAAACGCCTG TTTATGAACA AGGCGCAAGT ATTTTGCTAG GTTTTCATAA CGATGACGCA
GGCTTTGATG CTTCTCCAGA AGACCCTGTT TTCATTTTTG GTGACCACAC CTGTATCACA
CACTTATCTT GTTCAAAGTT CGATATATCC TCGAATGTAA TTCCTCTTAA GGGTAGCGTT
AGACCAACGA TTTGGACTTA CTATGCGATC CAAGGAAAGC AAGAGTTTCA AGAGTATCGA
CGTCATTGGT CTGAGTTTAT TATCAAAGAT GTTGTGCTAC CTCCGGTGGA ATTAGCGGAG
AAGTATGCTG AATTAGTAAC AACTAAATAC TTGATGATGG AGTCGCTGAA ACGTCAGTCT
AAAGAGCTAG AGCAGCTACG AGATACCTTG CTTCCTAAAT TGCTTTCCGG CGAAATCGAG
TTAGGAACAA GCGAAGAATT GGTTGAGGCT ATCTAA
 
Protein sequence
MTCSWPTVTL DECASFQEGY VNPTQKKEHY FDGPVKWLRA VDLNNGSIRN TSRTLSEEGF 
KSAGKSALLF EPGTLAISKS GTIGRIGILE DYMCGNRAVI NIKVDKDKCD NLYIFYVLLM
SRRVIETLAV GSVQKNLYTS ALGSLELRLP PLQVQAAIAK QLSDLDKKID LNTQTNQTLE
EMAQAIFKSW FVDFDPVKAK MNGKQPEGMD AATASLFPEK LVESELGLIP EGWDAVQVGD
IVQRLKPKKR YTKKQVEPYG KTPVYEQGAS ILLGFHNDDA GFDASPEDPV FIFGDHTCIT
HLSCSKFDIS SNVIPLKGSV RPTIWTYYAI QGKQEFQEYR RHWSEFIIKD VVLPPVELAE
KYAELVTTKY LMMESLKRQS KELEQLRDTL LPKLLSGEIE LGTSEELVEA I