| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3673 |
|---|
| Symbol | |
|---|
| ID | 6089441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 4055040 |
|---|
| End bp | 4056272 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641598760 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_001722393 |
|---|
| Protein GI | 170025888 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGA ATAATAAGGT GCCAGAGATT CGCTTTAAAG GGTTTGGTGG GGAATGGGAG
GATAAGGTAT TAGGTGAATT AGCTGAAATT GTTCGTGGCG CCAGTCCTCG CCCGATTGAA
GATCCTAAAT GGTTCGATAG TCAATCAAGT GTTGGTTGGT TACGTATTAG AGATGTGACC
GAGCAAGATG GCAGGATTCA CTATTTAGAG CAGAGAATTT CAAAACTTGG CCAAGAAAAA
ACTCGTGTAT TACATGAGAA ACACCTGCTG TTAAGCATAG CAGCGAGTGT TGGTAAACCT
GTAGTTAACT ATGTTGAAAC AGGGGTTCAC GATGGTTTCT TAATATTCAA AAAACCACTT
TTTGAACTTG AGTTTATGTA TCAATGGTTA AAATCCTTTG AAGCAAAGTG GCAACAATTT
GGCCAGCCCG GAAGCCAGGT TAACCTTAAT TCCGATATTG TTAAAAGTCA GGTCGTAGCA
ATTCCTACAA ATGAAGAACA AACCACCATC GGCAACTACT TCCAAAAACT CGATAGCCTA
ATCAACCAGC ACCAACAAAA GCATGACAAA CTCAGCAGCA TTAAAAAAGC CATGCTGGAA
AAAATGTTCC CCAAACAAGG CGAAACCATG CCAGAAATCC GCTTTAAAGG GTTTAGTGGG
GAGTGGAATT ACCTAGCTTT AGGTGAAAAC GCAAAATTTA CCAAAGGACA AGGTTATTCG
AAAGGTGATT TAGTTACGAG TGGATCGCCA ATCATTTTGT ATGGCCGACT TTATACAAAG
TATCAAACAG TCATTACTGG TGTTGACACA TTTGTAACTG AAAAAAATAA GTCCGTTAAA
AGTATCGGGG GAGAAGTTAT CGTTCCTGCT TCAGGCGAAT CTCCTGAAGA TATATCAAGG
GCGTCAGTTG TTAGTGAGCC GAATGTAATA ATTGGTGGTG ATCTGAATAT TGTATTACCC
AGCAAAAAGA TTCACTCAAC CTTTTTAGCT TTAGCAATAT CAAATGGCCA TTTAAAAAAG
AAGCTGTCTT CTAAGGCGCA AGGAAAATCT GTTGTTCATA TAAGAAATTC AGACTTGGCA
GATTTAGACC TGATTTTACC CACTGAATAC ATGGAACAAA CCGCAATAGG CAACTATTTC
CAAAAGCTCG ACGAGCTAAT CAACCAACAC CAACAGCAAA TCTCCAAACT CAATAACATC
AAGCAGGCCT GCTTAAGTAA AATGTTTATA TAG
|
|---|
| Protein sequence | MSVNNKVPEI RFKGFGGEWE DKVLGELAEI VRGASPRPIE DPKWFDSQSS VGWLRIRDVT
EQDGRIHYLE QRISKLGQEK TRVLHEKHLL LSIAASVGKP VVNYVETGVH DGFLIFKKPL
FELEFMYQWL KSFEAKWQQF GQPGSQVNLN SDIVKSQVVA IPTNEEQTTI GNYFQKLDSL
INQHQQKHDK LSSIKKAMLE KMFPKQGETM PEIRFKGFSG EWNYLALGEN AKFTKGQGYS
KGDLVTSGSP IILYGRLYTK YQTVITGVDT FVTEKNKSVK SIGGEVIVPA SGESPEDISR
ASVVSEPNVI IGGDLNIVLP SKKIHSTFLA LAISNGHLKK KLSSKAQGKS VVHIRNSDLA
DLDLILPTEY MEQTAIGNYF QKLDELINQH QQQISKLNNI KQACLSKMFI
|
|---|
| |