Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3793 |
Symbol | |
ID | 4480003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4557973 |
End bp | 4559250 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639728406 |
Product | restriction modification system DNA specificity subunit |
Protein accession | YP_871417 |
Protein GI | 117922225 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATA CGGTTCCAGA TAATTGGAAT GTGTTGCCTC TAGGCAGTGT TATAAAGCAA GTTATTGATT TTAGAGGTCG TACTCCCAAA AAGCTTGGGA TGGAGTGGGG TGGCGGTAAC ATCCGAGCAT TATCCGCGAA TAATGTTCAG ATGGGACGAG TTGATTTTAA TAAAGAATGT TATTTAGCGT CGGATGAGCT TTATGACAAA TGGATGACGA AGGGGACGAC TGAAGTAGGC GACATTCTTT TTACGATGGA AGCTCCATTA GGAAATATTG CACTAGTACC GAATGACGAC CGATATATCT TAAGTCAGAG GGTTATACTG CTTAAGAATG ATAAGTCTAA AGCATCATCG GATTTTTTGT TTCAACAACT TAGGAGCGAC AGCTTTCAGG ATACTCTTAG AGAGAATGCG ACAGGAACTA CTGCTCAGGG GATTCAGCAA AAGCGGTTGG TCACCTTAGA TGTTGTTTTA CCCCCTCTCC CCGAACAACA AAAAATCGCC AAGATCCTGA CCTCGGTGGA TGAGGTGATA GAGAAAACAC AGGCGCAAAT CGACAAGCTC AAAGACCTGA AAACCGGCAT GATGCAGGAG CTGTTAACCC AAGGTGTCGG CATCGATGGC AAGCCGCACA CCGAGTTTAA GGATTCCCCT GTCGGCCGGA TTCCGAAAGC TTGGAATTGC GTAACACTAA AGAATTTGTC GAAGCGAATC ACTGACGGTA CTCATCAGAC AGTGAAGACC TCGCCAGATG GAACTATTCC TTTTCTTTAC GTATCTTGTG TAAGAGATGG GAACATTGAT TGGGAAAAGG CTTCGTTCCT TACTGAGGAA ATGTACGAAC TGGCTTCAAA AGGAAGAAAG CCGGAGAATG GGGATATTTT GTACACTGCG GTTGGTTCGT ATGGCCATGC GGCTATTGTC TCAGGAGATA ATAGGTTTAG TTTTCAGCGT CACATTGCTT TTATTCAACC TAATCATGAA AAAATCGACT CCGAATTTTT AGTATCGTTT TTGAATAGTC CGTTGGGTAA AAAACAAGCT GATTTGTATG CGATAGGAAA CGCTCAGTTG ACTGTGACTC TCGGAGATCT CGGTAAATTT AAAGTAGCTC TTCCTGACAT TGCAGAGCAG CAAAGAATTG CCAAAATTTT CAATGGAATT GATAACAGGA TTATCGTTGT TCAGCGAAAA TTGACGAGTT TAGGGAATAC TAAAAAAGCC CTCATGCAGG ATCTACTAAC GGGCAAGGTG CGGGTAGCCA TCGACTAG
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Protein sequence | MSNTVPDNWN VLPLGSVIKQ VIDFRGRTPK KLGMEWGGGN IRALSANNVQ MGRVDFNKEC YLASDELYDK WMTKGTTEVG DILFTMEAPL GNIALVPNDD RYILSQRVIL LKNDKSKASS DFLFQQLRSD SFQDTLRENA TGTTAQGIQQ KRLVTLDVVL PPLPEQQKIA KILTSVDEVI EKTQAQIDKL KDLKTGMMQE LLTQGVGIDG KPHTEFKDSP VGRIPKAWNC VTLKNLSKRI TDGTHQTVKT SPDGTIPFLY VSCVRDGNID WEKASFLTEE MYELASKGRK PENGDILYTA VGSYGHAAIV SGDNRFSFQR HIAFIQPNHE KIDSEFLVSF LNSPLGKKQA DLYAIGNAQL TVTLGDLGKF KVALPDIAEQ QRIAKIFNGI DNRIIVVQRK LTSLGNTKKA LMQDLLTGKV RVAID
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