Gene Shewana3_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3793 
Symbol 
ID4480003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4557973 
End bp4559250 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content43% 
IMG OID639728406 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_871417 
Protein GI117922225 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA CGGTTCCAGA TAATTGGAAT GTGTTGCCTC TAGGCAGTGT TATAAAGCAA 
GTTATTGATT TTAGAGGTCG TACTCCCAAA AAGCTTGGGA TGGAGTGGGG TGGCGGTAAC
ATCCGAGCAT TATCCGCGAA TAATGTTCAG ATGGGACGAG TTGATTTTAA TAAAGAATGT
TATTTAGCGT CGGATGAGCT TTATGACAAA TGGATGACGA AGGGGACGAC TGAAGTAGGC
GACATTCTTT TTACGATGGA AGCTCCATTA GGAAATATTG CACTAGTACC GAATGACGAC
CGATATATCT TAAGTCAGAG GGTTATACTG CTTAAGAATG ATAAGTCTAA AGCATCATCG
GATTTTTTGT TTCAACAACT TAGGAGCGAC AGCTTTCAGG ATACTCTTAG AGAGAATGCG
ACAGGAACTA CTGCTCAGGG GATTCAGCAA AAGCGGTTGG TCACCTTAGA TGTTGTTTTA
CCCCCTCTCC CCGAACAACA AAAAATCGCC AAGATCCTGA CCTCGGTGGA TGAGGTGATA
GAGAAAACAC AGGCGCAAAT CGACAAGCTC AAAGACCTGA AAACCGGCAT GATGCAGGAG
CTGTTAACCC AAGGTGTCGG CATCGATGGC AAGCCGCACA CCGAGTTTAA GGATTCCCCT
GTCGGCCGGA TTCCGAAAGC TTGGAATTGC GTAACACTAA AGAATTTGTC GAAGCGAATC
ACTGACGGTA CTCATCAGAC AGTGAAGACC TCGCCAGATG GAACTATTCC TTTTCTTTAC
GTATCTTGTG TAAGAGATGG GAACATTGAT TGGGAAAAGG CTTCGTTCCT TACTGAGGAA
ATGTACGAAC TGGCTTCAAA AGGAAGAAAG CCGGAGAATG GGGATATTTT GTACACTGCG
GTTGGTTCGT ATGGCCATGC GGCTATTGTC TCAGGAGATA ATAGGTTTAG TTTTCAGCGT
CACATTGCTT TTATTCAACC TAATCATGAA AAAATCGACT CCGAATTTTT AGTATCGTTT
TTGAATAGTC CGTTGGGTAA AAAACAAGCT GATTTGTATG CGATAGGAAA CGCTCAGTTG
ACTGTGACTC TCGGAGATCT CGGTAAATTT AAAGTAGCTC TTCCTGACAT TGCAGAGCAG
CAAAGAATTG CCAAAATTTT CAATGGAATT GATAACAGGA TTATCGTTGT TCAGCGAAAA
TTGACGAGTT TAGGGAATAC TAAAAAAGCC CTCATGCAGG ATCTACTAAC GGGCAAGGTG
CGGGTAGCCA TCGACTAG
 
Protein sequence
MSNTVPDNWN VLPLGSVIKQ VIDFRGRTPK KLGMEWGGGN IRALSANNVQ MGRVDFNKEC 
YLASDELYDK WMTKGTTEVG DILFTMEAPL GNIALVPNDD RYILSQRVIL LKNDKSKASS
DFLFQQLRSD SFQDTLRENA TGTTAQGIQQ KRLVTLDVVL PPLPEQQKIA KILTSVDEVI
EKTQAQIDKL KDLKTGMMQE LLTQGVGIDG KPHTEFKDSP VGRIPKAWNC VTLKNLSKRI
TDGTHQTVKT SPDGTIPFLY VSCVRDGNID WEKASFLTEE MYELASKGRK PENGDILYTA
VGSYGHAAIV SGDNRFSFQR HIAFIQPNHE KIDSEFLVSF LNSPLGKKQA DLYAIGNAQL
TVTLGDLGKF KVALPDIAEQ QRIAKIFNGI DNRIIVVQRK LTSLGNTKKA LMQDLLTGKV
RVAID