Gene VIBHAR_01116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01116 
Symbol 
ID5553288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1130384 
End bp1131586 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content39% 
IMG OID640906608 
Producthypothetical protein 
Protein accessionYP_001444334 
Protein GI156973427 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA CTAAAGACGT ACCTGAAATT CGTTTTAATG ATTTTGTAGG TAACTGGCAG 
CTATTGAAGC TAGAGGATGT AGCGCAGTTC CATGATGAGC GAAGAAAACC GATTACCGAA
AGTGCTCGAG AAGCTGGTCC ACACCCCTAC TATGGTGCTT CTGGAATCAT TGATTATGTT
AAAGATTATA TTTTTGATGA AGAGATGATT CTTCTAAGTG AAGATGGCGC AAACATCATA
GATAGAAATT ATAGAGTATG CTTTTTAGCT AGTGGCCAAT ATTGGGTTAA TAATCATGCG
CATGTACTCA AAGCGAAGCA AGGTAATAAC AATCTTTTTT TGTGCGAAAG CTTAGAGCGT
TTGCGTTATG ACAAGTACAA CACAGGGACA GCACAGCCTA AGATTAATCA GGATGTTTGC
AGGAACCTGC CGGTCTACAT AACTGATAAT GATGAGCAAG AAATAATCGG CAACTACTTC
CAAAAGCTCG ACACTCTGAT CAACCAACAC CAGCAAAAAC ACGACAAGCT CAGCAACTTG
AAAAAATCCA TGCAGGAAAA GATGTTTCCA AAGGCAGGCG AAACTGTGCC AGAAATTCGC
TTTGATGGGT TTAGTGGGGA TTGGGACAGC AAACCATTAA GCAAGGTTGC AAGCAATATT
TCTGATGGTG ATTGGATTGA GGCTGAACAT ATTTTTCCGA ATGGGAAATT CAGGATAATA
CAAACCGGTA ACATTGGTGT TGGTGAGTTC TTAAACAACG AAAAACATGC CAAATATTTT
CACCAAAGAA ACTTTGATTT AATTAAAGCA AATGAAATCT ACCCTGGTGA CATTTTGATT
TCGAGACTTG CTGAACCAGC TGGTCGTGCA GCTATTCTGC CTGATACTGG CTTTCGTATG
GTTACGGCTG TTGATGTAGC GATTGTTAGG CGTGAAGAGT GTTATGACTC ATATTTCTTA
ATGAGCTATT TAAATACTGC GGAGTGTTTA AAGGTGGTCA GTGAGGGAGT GTCTGGAACA
TCCCACAAGC GTATCAGCAG GGCGAATTTG GTTAAGGTTA ATATCCCATT TCCAAGTATT
GACGAGCAAA TAAAGATTGG GAAGTACTTT GAAAATTTAG ATGGGCTAAT AAATCAACAC
AACCAACAAA TCACCAAAAT CAAAAACATT AAGCAAGCAT GCTTAGATAA GATGTTCGTG
TAA
 
Protein sequence
MSMTKDVPEI RFNDFVGNWQ LLKLEDVAQF HDERRKPITE SAREAGPHPY YGASGIIDYV 
KDYIFDEEMI LLSEDGANII DRNYRVCFLA SGQYWVNNHA HVLKAKQGNN NLFLCESLER
LRYDKYNTGT AQPKINQDVC RNLPVYITDN DEQEIIGNYF QKLDTLINQH QQKHDKLSNL
KKSMQEKMFP KAGETVPEIR FDGFSGDWDS KPLSKVASNI SDGDWIEAEH IFPNGKFRII
QTGNIGVGEF LNNEKHAKYF HQRNFDLIKA NEIYPGDILI SRLAEPAGRA AILPDTGFRM
VTAVDVAIVR REECYDSYFL MSYLNTAECL KVVSEGVSGT SHKRISRANL VKVNIPFPSI
DEQIKIGKYF ENLDGLINQH NQQITKIKNI KQACLDKMFV