Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01116 |
Symbol | |
ID | 5553288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1130384 |
End bp | 1131586 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640906608 |
Product | hypothetical protein |
Protein accession | YP_001444334 |
Protein GI | 156973427 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATGA CTAAAGACGT ACCTGAAATT CGTTTTAATG ATTTTGTAGG TAACTGGCAG CTATTGAAGC TAGAGGATGT AGCGCAGTTC CATGATGAGC GAAGAAAACC GATTACCGAA AGTGCTCGAG AAGCTGGTCC ACACCCCTAC TATGGTGCTT CTGGAATCAT TGATTATGTT AAAGATTATA TTTTTGATGA AGAGATGATT CTTCTAAGTG AAGATGGCGC AAACATCATA GATAGAAATT ATAGAGTATG CTTTTTAGCT AGTGGCCAAT ATTGGGTTAA TAATCATGCG CATGTACTCA AAGCGAAGCA AGGTAATAAC AATCTTTTTT TGTGCGAAAG CTTAGAGCGT TTGCGTTATG ACAAGTACAA CACAGGGACA GCACAGCCTA AGATTAATCA GGATGTTTGC AGGAACCTGC CGGTCTACAT AACTGATAAT GATGAGCAAG AAATAATCGG CAACTACTTC CAAAAGCTCG ACACTCTGAT CAACCAACAC CAGCAAAAAC ACGACAAGCT CAGCAACTTG AAAAAATCCA TGCAGGAAAA GATGTTTCCA AAGGCAGGCG AAACTGTGCC AGAAATTCGC TTTGATGGGT TTAGTGGGGA TTGGGACAGC AAACCATTAA GCAAGGTTGC AAGCAATATT TCTGATGGTG ATTGGATTGA GGCTGAACAT ATTTTTCCGA ATGGGAAATT CAGGATAATA CAAACCGGTA ACATTGGTGT TGGTGAGTTC TTAAACAACG AAAAACATGC CAAATATTTT CACCAAAGAA ACTTTGATTT AATTAAAGCA AATGAAATCT ACCCTGGTGA CATTTTGATT TCGAGACTTG CTGAACCAGC TGGTCGTGCA GCTATTCTGC CTGATACTGG CTTTCGTATG GTTACGGCTG TTGATGTAGC GATTGTTAGG CGTGAAGAGT GTTATGACTC ATATTTCTTA ATGAGCTATT TAAATACTGC GGAGTGTTTA AAGGTGGTCA GTGAGGGAGT GTCTGGAACA TCCCACAAGC GTATCAGCAG GGCGAATTTG GTTAAGGTTA ATATCCCATT TCCAAGTATT GACGAGCAAA TAAAGATTGG GAAGTACTTT GAAAATTTAG ATGGGCTAAT AAATCAACAC AACCAACAAA TCACCAAAAT CAAAAACATT AAGCAAGCAT GCTTAGATAA GATGTTCGTG TAA
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Protein sequence | MSMTKDVPEI RFNDFVGNWQ LLKLEDVAQF HDERRKPITE SAREAGPHPY YGASGIIDYV KDYIFDEEMI LLSEDGANII DRNYRVCFLA SGQYWVNNHA HVLKAKQGNN NLFLCESLER LRYDKYNTGT AQPKINQDVC RNLPVYITDN DEQEIIGNYF QKLDTLINQH QQKHDKLSNL KKSMQEKMFP KAGETVPEIR FDGFSGDWDS KPLSKVASNI SDGDWIEAEH IFPNGKFRII QTGNIGVGEF LNNEKHAKYF HQRNFDLIKA NEIYPGDILI SRLAEPAGRA AILPDTGFRM VTAVDVAIVR REECYDSYFL MSYLNTAECL KVVSEGVSGT SHKRISRANL VKVNIPFPSI DEQIKIGKYF ENLDGLINQH NQQITKIKNI KQACLDKMFV
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