Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2378 |
Symbol | |
ID | 7136185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2124795 |
End bp | 2125946 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643530743 |
Product | type I restriction-modification system, S subunit |
Protein accession | YP_002426767 |
Protein GI | 218667989 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAACTC GCACCAAACA GAAAAACCGC GATGAAAAAA TTACTCGCGT GCTGACGAAC TCAGCCGAGT TTGGCGTGAT GGACCAGCGC GACTTCTTCG ACAAAGAAAT TGCCACGCAA GGCAATCTCG AGAGCTATTT CGTAGTTGAG CTGGGCAGCT ATGTTTACAA CCCGCGCATC TCTGCAACAG CACCTGTTGG CCCCATTTCT AAGAACAAAG TTGGCACTGG CGTCATGTCG CCGCTCTACA CCGTCTTCAA GTTCAAAGAC GGTGGCAATG ACTTTTATGA GCACTACTTC AAGACAACCG GCTGGCACAC CTACATGCGG CAGGCATCCA GTACAGGCGC GCGGCATGAT CGAATGGCCA TCTCCAGCGA CGATTTCATG GCCATGCCTT TGCCTGTTCC GACACCGAAG GAACAACAAA AAATCGCCGA GTGCCTGAGT TCGGTGGACG CGCTGATGGC CGCGCAAGCG CGGAAAGTGG ACGCGCTCAA GACCCATAAA AAAGGGCTGA TGCAGCAGCT TTTCCCCACG GAGGGCGAAA CCCAACCCCG CCTGCGCTTC CCCGAATTCC AAAACGCCGG GGAGTGGAAC AAGACGACCT TGGGTGAAGC AGCGACATTC TTCAACGGCC GAGCATACAA ACAGGAAGAA CTGCTTGAAT CCGGAAAGTA TCCAGTTCTC CGCGTTGGAA ATTTCTTCAC CAACAACAAT TGGTATTACT CAGACCTTGA ACTGGATGAG ACAAAGTATT GTGACAAAGG CGATTTGCTT TACGCATGGT CGGCGTCGTT CGGGCCGCGT ATGTGGCACG GGGTAAAAGT GATTTATCAC TACCACATCT GGAAGGTCGA ACAACACAGT GGAATAGACC GACAGTTCCT TTTCATCACA CTCGAAAATG AAACTGAGAG GATGAAATCC AACTCAGCAA ATGGATTGGG ACTTCTGCAC ATTACGAAGG GAACCATCGA GGGCTGGGAC ACTGCATTCC CATCACCGCC AGAACAACAC CGCATCGCCT CCTGCCTGAG CAGCCTCGAC GCCCTGATCA CCCTGGAGAC CCAAAAGCTC GAAGCCCTCA AGACCCACAA GAAAGGGCTG ATGCAGCAGC TTTTCCCAGT ACTCAACGAG GTGCAGGGAT GA
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Protein sequence | MATRTKQKNR DEKITRVLTN SAEFGVMDQR DFFDKEIATQ GNLESYFVVE LGSYVYNPRI SATAPVGPIS KNKVGTGVMS PLYTVFKFKD GGNDFYEHYF KTTGWHTYMR QASSTGARHD RMAISSDDFM AMPLPVPTPK EQQKIAECLS SVDALMAAQA RKVDALKTHK KGLMQQLFPT EGETQPRLRF PEFQNAGEWN KTTLGEAATF FNGRAYKQEE LLESGKYPVL RVGNFFTNNN WYYSDLELDE TKYCDKGDLL YAWSASFGPR MWHGVKVIYH YHIWKVEQHS GIDRQFLFIT LENETERMKS NSANGLGLLH ITKGTIEGWD TAFPSPPEQH RIASCLSSLD ALITLETQKL EALKTHKKGL MQQLFPVLNE VQG
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