| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0382 |
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| Symbol | hsdS-1 |
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| ID | 1168259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 395983 |
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| End bp | 397302 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637342384 |
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| Product | type I restriction-modification system, S subunit |
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| Protein accession | NP_716020 |
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| Protein GI | 24371978 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATA GTATCCTTAG CCCATTTGGT AAAATACCCA ATGACTGGGA GTATCAGATA
ATTATTGATA ATGTTGAGTT TTTGACAGGT CCAGCTTTTG ATAGCAGCTT ATTTAACACC
GAATCGCGTG GTGCTAGGTT GGTTCGTGGA ATTAACTTGA CTCAAGGTTC AACTCGTTGG
GGAGAAGATA AGACTAAATA TTGGGATGTC GAGTTAAATA ACCTTAAAAA ATACCAATTA
GCCATAAACG ATATATTGAT CGGTATGGAT GGTTCATTAG TTGGTAAAAA CTATGCTTAT
TTAAAACAGT CAGATTTACC AGCATTATTA GTACAGCGAG TTGCTCGACT TAGAGCCAAA
AGCAATCTGC ACTCTAAGTA TCTGTATTAT ATGTATGCTA CTGATTTTTG GTTGGATTAT
GTAGAGGTTG TAAAAACTAA CTCAGGTATT CCACATATCT CTAATGGTGA TATTAAGAAT
TTTAGATTCC CATTTCCTCC ACTCCCAGAG CAGCAAAAAA TTGCGGCAAT TTTGACTTCT
GTGGATGAGG TAATTGAAAA AACACAGGCG CAAATCGACA AGCTCAAAGA TTTAAAAAGC
GGCATGATGC AGGAACTGCT CACAAAGGGT GTTGGCATCA AGCAAGGTGA TAAATATGTG
CCCCACATCG AATTTAAAGA CTCCCCCGTT GGCAAAATCC CAAAGAGCTG GGAAGTTAAA
CCGTTAAACT CCGTTGTACT CAAGATTATT GATTGTGAAC ATAAGACCGC TCCATATGTC
GATAAATCAG AGTACTTAGT GGTTAGGACT AGTAATGTTA GGCACGGCGA ACTTGTATTA
GACGATATGA AATACACTCA TGCAGATGGT TATGCTGAAT GGACAAATAG AGCTATCCCC
TCGTTAGGAG ATGTCCTTTT TACTAGGGAA GCTCCCGCTG GTGAATCTTG TCTTGTGCCA
GAGAATACAA AGGTCTGTAT GGGACAACGT ATGGTACTTC TTCGACCAGA CGCTAATGTG
ATATTTTCAA ATTTTTTCTC TTTATTTTTA ACTTCAGAAG CTGCTTCATG TGCTATTTAT
GAGCGATCTA TTGGTACAAC GGTTAGTCGG ATCAATATAG AGGATATTAA GCGTATCCCA
TGCATTGTTC CTCCATTAAG CGAGCAACAA GAAATCTCAA AAGCGATACA AAGCGTTCAA
AACTCAATTT TAAACAAACA GGAAAAGCTA CAATCGTTGA AAAACCTCAA AAAAGCCCTG
ATGCAGGATC TATTGACGGG TAAAGTGCGG GTTAAGGTCG ATAACGATTT AGTAGTCTAA
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| Protein sequence | MSHSILSPFG KIPNDWEYQI IIDNVEFLTG PAFDSSLFNT ESRGARLVRG INLTQGSTRW
GEDKTKYWDV ELNNLKKYQL AINDILIGMD GSLVGKNYAY LKQSDLPALL VQRVARLRAK
SNLHSKYLYY MYATDFWLDY VEVVKTNSGI PHISNGDIKN FRFPFPPLPE QQKIAAILTS
VDEVIEKTQA QIDKLKDLKS GMMQELLTKG VGIKQGDKYV PHIEFKDSPV GKIPKSWEVK
PLNSVVLKII DCEHKTAPYV DKSEYLVVRT SNVRHGELVL DDMKYTHADG YAEWTNRAIP
SLGDVLFTRE APAGESCLVP ENTKVCMGQR MVLLRPDANV IFSNFFSLFL TSEAASCAIY
ERSIGTTVSR INIEDIKRIP CIVPPLSEQQ EISKAIQSVQ NSILNKQEKL QSLKNLKKAL
MQDLLTGKVR VKVDNDLVV
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