144 homologs were found in PanDaTox collection
for query gene Veis_1566 on replicon NC_008786
Organism: Verminephrobacter eiseniae EF01-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_1566  restriction modification system DNA specificity subunit  100 
 
 
403 aa  826    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0293394  unclonable  0.0000192379 
 
 
-
 
NC_007947  Mfla_1176  restriction modification system DNA specificity subunit  57.07 
 
 
408 aa  436  1e-121  Methylobacillus flagellatus KT  Bacteria  normal  0.882603  normal 
 
 
-
 
NC_009939  Dgeo_3109  restriction modification system DNA specificity subunit  61.92 
 
 
426 aa  421  1e-116  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011206  Lferr_0967  restriction modification system DNA specificity domain  43.75 
 
 
426 aa  214  2.9999999999999995e-54  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.800586  normal  0.821104 
 
 
-
 
NC_011761  AFE_0829  type I restriction-modification system, S subunit  44.19 
 
 
409 aa  179  5.999999999999999e-44  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.232689  n/a   
 
 
-
 
NC_011726  PCC8801_2214  restriction modification system DNA specificity domain protein  35.61 
 
 
457 aa  147  4.0000000000000006e-34  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011059  Paes_0308  restriction modification system DNA specificity domain  35.25 
 
 
456 aa  140  6e-32  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0548885  normal  0.428283 
 
 
-
 
NC_012912  Dd1591_4240  Restriction endonuclease S subunits-like protein  34.5 
 
 
436 aa  117  3.9999999999999997e-25  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1433  restriction modification system DNA specificity subunit  30.37 
 
 
372 aa  116  6e-25  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1357  restriction modification system DNA specificity domain  30.28 
 
 
425 aa  112  8.000000000000001e-24  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0971497  n/a   
 
 
-
 
NC_010581  Bind_2673  restriction modification system DNA specificity subunit  33.17 
 
 
415 aa  111  2.0000000000000002e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.574489 
 
 
-
 
NC_011761  AFE_0686  type I restriction-modification system, S subunit, putative  40.29 
 
 
561 aa  108  2e-22  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.840975  n/a   
 
 
-
 
NC_011206  Lferr_0835  restriction modification system DNA specificity domain  40.29 
 
 
563 aa  108  2e-22  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.835919  normal  0.945638 
 
 
-
 
NC_008530  LGAS_0901  restriction endonuclease S subunit  29.2 
 
 
363 aa  104  3e-21  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000124976  hitchhiker  0.000000573897 
 
 
-
 
NC_013161  Cyan8802_2277  restriction modification system DNA specificity domain protein  31.02 
 
 
433 aa  103  5e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.200455  hitchhiker  0.00000677276 
 
 
-
 
NC_009832  Spro_4083  restriction modification system DNA specificity subunit  28.4 
 
 
409 aa  103  7e-21  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1158  restriction modification system DNA specificity subunit  27.69 
 
 
454 aa  102  1e-20  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000117149  normal 
 
 
-
 
NC_010730  SYO3AOP1_0387  restriction modification system DNA specificity domain  28.87 
 
 
435 aa  102  2e-20  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0681662  n/a   
 
 
-
 
NC_010831  Cphamn1_0334  restriction modification system DNA specificity domain  31.89 
 
 
430 aa  101  2e-20  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.284396 
 
 
-
 
NC_002976  SERP2471  type I restriction-modification system S subunit  29.38 
 
 
381 aa  100  4e-20  Staphylococcus epidermidis RP62A  Bacteria  decreased coverage  0.0091078  n/a   
 
 
-
 
NC_012917  PC1_0864  restriction modification system DNA specificity domain protein  26.05 
 
 
413 aa  100  4e-20  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0689213  n/a   
 
 
-
 
NC_011761  AFE_1576  type I restriction-modification system, S subunit  28.71 
 
 
399 aa  99.4  1e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.200835  n/a   
 
 
-
 
NC_009718  Fnod_0507  restriction modification system DNA specificity subunit  25.45 
 
 
429 aa  94.4  3e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B4821  type I restriction-modification system, endonuclease S subunit  27.13 
 
 
382 aa  94  5e-18  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1710  restriction modification system DNA specificity subunit  34.64 
 
 
414 aa  93.6  5e-18  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1037  restriction modification system DNA specificity domain  29.6 
 
 
364 aa  89.4  1e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0890662  normal 
 
 
-
 
NC_013946  Mrub_2452  restriction modification system DNA specificity domain-containing protein  26.19 
 
 
419 aa  85.9  0.000000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.587532 
 
 
-
 
NC_009523  RoseRS_2689  restriction modification system DNA specificity subunit  30.68 
 
 
290 aa  83.2  0.000000000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.841682  normal 
 
 
-
 
NC_008043  TM1040_3550  restriction modification system DNA specificity subunit  26.6 
 
 
417 aa  82.4  0.00000000000001  Ruegeria sp. TM1040  Bacteria  normal  0.257959  normal  0.256697 
 
 
-
 
NC_010003  Pmob_1897  restriction modification system DNA specificity subunit  27.81 
 
 
433 aa  82.8  0.00000000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1307  restriction modification system DNA specificity subunit  27.72 
 
 
285 aa  81.3  0.00000000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.186237 
 
 
-
 
NC_007644  Moth_1671  restriction modification system DNA specificity subunit  31.69 
 
 
442 aa  81.3  0.00000000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.517259  hitchhiker  0.00037426 
 
 
-
 
NC_009665  Shew185_1978  restriction modification system DNA specificity subunit  32.65 
 
 
616 aa  79  0.0000000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0198  restriction modification system DNA specificity domain protein  23.85 
 
 
386 aa  78.2  0.0000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  0.719886  decreased coverage  0.000218103 
 
 
-
 
NC_008599  CFF8240_1393  restriction and modification enzyme CjeI  30.5 
 
 
1285 aa  79  0.0000000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1132  restriction modification system DNA specificity subunit  36.08 
 
 
556 aa  78.6  0.0000000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.817215  n/a   
 
 
-
 
NC_008751  Dvul_0487  restriction modification system DNA specificity subunit  28.15 
 
 
438 aa  78.2  0.0000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.700794  normal  0.0187002 
 
 
-
 
NC_013456  VEA_003235  type I restriction-modification system specificity subunit S  26.37 
 
 
437 aa  77  0.0000000000005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1061  putative type I restriction-modification system, S subunit  29.59 
 
 
528 aa  76.6  0.0000000000006  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0287  restriction modification system DNA specificity domain protein  26.77 
 
 
429 aa  75.1  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009943  Dole_2726  restriction modification system DNA specificity subunit  25.52 
 
 
500 aa  75.1  0.000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3132  restriction modification system DNA specificity domain protein  23.32 
 
 
424 aa  74.7  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.474681 
 
 
-
 
NC_010085  Nmar_0607  restriction modification system DNA specificity subunit  26.39 
 
 
438 aa  73.9  0.000000000005  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010655  Amuc_1914  restriction modification system DNA specificity domain  28.57 
 
 
386 aa  73.2  0.000000000008  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  hitchhiker  0.00381757 
 
 
-
 
NC_013501  Rmar_1091  restriction modification system DNA specificity domain protein  28.89 
 
 
444 aa  72.8  0.000000000009  Rhodothermus marinus DSM 4252  Bacteria  normal  0.17387  n/a   
 
 
-
 
NC_009438  Sputcn32_0160  restriction modification system DNA specificity subunit  26.67 
 
 
399 aa  72.8  0.00000000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0842  type I restriction-modification enzyme, S subunit, putative  30.99 
 
 
476 aa  70.9  0.00000000004  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2722  restriction modification system DNA specificity domain protein  25 
 
 
385 aa  70.9  0.00000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3129  restriction modification system DNA specificity subunit  28.68 
 
 
416 aa  70.9  0.00000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.343622  normal  0.0250234 
 
 
-
 
NC_011831  Cagg_1805  restriction modification system DNA specificity domain protein  26.51 
 
 
423 aa  69.7  0.00000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.745604  normal  0.535567 
 
 
-
 
NC_010682  Rpic_0448  restriction modification system DNA specificity domain  26.12 
 
 
435 aa  68.9  0.0000000001  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.00000159098 
 
 
-
 
NC_007908  Rfer_1060  restriction modification system DNA specificity subunit  28.8 
 
 
397 aa  68.6  0.0000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.588803  n/a   
 
 
-
 
NC_008787  CJJ81176_0777  type I restriction modification DNA specificity domain-containing protein  25.91 
 
 
422 aa  67.8  0.0000000003  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00318537  n/a   
 
 
-
 
NC_014148  Plim_1220  restriction modification system DNA specificity domain protein  25.52 
 
 
620 aa  67.8  0.0000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0016  restriction modification system DNA specificity subunit  27.52 
 
 
432 aa  68.2  0.0000000003  Methanococcus maripaludis C7  Archaea  normal  0.0597513  hitchhiker  0.0012471 
 
 
-
 
NC_009504  BOV_A0789  type I restriction-modification system, S subunit  24.62 
 
 
407 aa  67.4  0.0000000004  Brucella ovis ATCC 25840  Bacteria  normal  0.190219  n/a   
 
 
-
 
NC_004311  BRA0841  type I restriction-modification system, S subunit  23.6 
 
 
407 aa  66.6  0.0000000007  Brucella suis 1330  Bacteria  normal  0.629279  n/a   
 
 
-
 
NC_011668  Sbal223_4454  restriction modification system DNA specificity domain protein  27.48 
 
 
406 aa  66.2  0.000000001  Shewanella baltica OS223  Bacteria  normal  0.859615  normal 
 
 
-
 
NC_008573  Shewana3_4163  restriction modification system DNA specificity subunit  25.48 
 
 
405 aa  66.2  0.000000001  Shewanella sp. ANA-3  Bacteria  normal  0.864984  normal  0.0584456 
 
 
-
 
NC_012912  Dd1591_4252  restriction modification system DNA specificity domain protein  27.19 
 
 
462 aa  65.9  0.000000001  Dickeya zeae Ech1591  Bacteria  normal  0.132013  n/a   
 
 
-
 
NC_011899  Hore_20210  restriction modification system DNA specificity domain protein  30.9 
 
 
565 aa  65.5  0.000000002  Halothermothrix orenii H 168  Bacteria  normal  0.266778  n/a   
 
 
-
 
NC_013411  GYMC61_1674  restriction modification system DNA specificity domain protein  28.18 
 
 
477 aa  64.3  0.000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  25.46 
 
 
425 aa  63.5  0.000000006  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3653  type I restriction enzyme StySPI specificity protein  29.29 
 
 
460 aa  63.2  0.000000009  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.234587  normal  0.701676 
 
 
-
 
NC_007908  Rfer_0030  restriction modification system DNA specificity subunit  25.71 
 
 
447 aa  62.8  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.539395  n/a   
 
 
-
 
NC_011899  Hore_04450  restriction modification system DNA specificity domain protein  24.91 
 
 
422 aa  62.8  0.00000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3525  restriction modification system DNA specificity subunit  28.79 
 
 
420 aa  61.6  0.00000002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1095  restriction modification system DNA specificity subunit  27.57 
 
 
450 aa  61.2  0.00000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2598  type I restriction-modification enzyme, S subunit  24.02 
 
 
417 aa  60.1  0.00000006  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0133376  n/a   
 
 
-
 
NC_011832  Mpal_1094  restriction modification system DNA specificity domain protein  29.2 
 
 
205 aa  59.7  0.00000008  Methanosphaerula palustris E1-9c  Archaea  normal  0.0782363  normal  0.473834 
 
 
-
 
NC_010003  Pmob_1071  restriction modification system DNA specificity subunit  21.31 
 
 
429 aa  58.9  0.0000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011061  Paes_2397  restriction modification system DNA specificity domain  27.46 
 
 
417 aa  58.2  0.0000002  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000238697  n/a   
 
 
-
 
NC_011206  Lferr_0227  restriction modification system DNA specificity domain  24.15 
 
 
395 aa  58.9  0.0000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3267  restriction modification system DNA specificity subunit  26.11 
 
 
557 aa  58.5  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0920403  decreased coverage  0.00535253 
 
 
-
 
NC_008043  TM1040_3540  restriction modification system DNA specificity subunit  31.94 
 
 
387 aa  58.9  0.0000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2909  restriction modification system DNA specificity subunit  26.57 
 
 
440 aa  58.9  0.0000002  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1027  restriction modification system DNA specificity subunit  28.1 
 
 
420 aa  58.9  0.0000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2346  restriction modification system DNA specificity subunit  31.58 
 
 
392 aa  58.5  0.0000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.104931  normal  0.0105772 
 
 
-
 
NC_009049  Rsph17029_1858  restriction modification system DNA specificity subunit  26.01 
 
 
456 aa  57.8  0.0000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0508  restriction modification system DNA specificity subunit  25.74 
 
 
511 aa  57.8  0.0000004  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_3089  restriction modification system DNA specificity domain protein  33.33 
 
 
520 aa  57.4  0.0000004  Spirosoma linguale DSM 74  Bacteria  normal  0.497517  normal  0.376247 
 
 
-
 
NC_010803  Clim_0128  N-6 DNA methylase  33.06 
 
 
846 aa  57.4  0.0000005  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0132  restriction modification system DNA specificity subunit  27.1 
 
 
427 aa  57  0.0000006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.47299 
 
 
-
 
NC_013158  Huta_0102  restriction modification system DNA specificity domain protein  21.9 
 
 
442 aa  56.6  0.0000007  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_004347  SO_0382  type I restriction-modification system, S subunit  22.57 
 
 
439 aa  56.6  0.0000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_2097  restriction modification system DNA specificity subunit  30.77 
 
 
393 aa  56.2  0.0000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0149  restriction modification system DNA specificity subunit  25.93 
 
 
400 aa  55.5  0.000002  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0262  type I restriction-modification system specificity determinant  24.29 
 
 
360 aa  55.1  0.000002  Xylella fastidiosa M12  Bacteria  normal  0.874092  n/a   
 
 
-
 
NC_010814  Glov_0637  restriction modification system DNA specificity domain  22.18 
 
 
422 aa  55.5  0.000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE0368  type I restriction-modification system, S subunit, putative  22.38 
 
 
562 aa  54.7  0.000003  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0500  restriction modification system DNA specificity subunit  23.99 
 
 
413 aa  54.7  0.000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.565018  normal 
 
 
-
 
NC_008740  Maqu_0414  restriction modification system DNA specificity subunit  27.17 
 
 
439 aa  54.7  0.000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.405933  n/a   
 
 
-
 
NC_008740  Maqu_2391  restriction modification system DNA specificity subunit  24.53 
 
 
374 aa  54.3  0.000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.164769  n/a   
 
 
-
 
NC_012039  Cla_0347  type I restriction-modification system, S subunit  24.28 
 
 
390 aa  54.7  0.000003  Campylobacter lari RM2100  Bacteria  hitchhiker  0.00000269296  n/a   
 
 
-
 
NC_009943  Dole_0249  restriction modification system DNA specificity subunit  23.34 
 
 
393 aa  54.7  0.000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_1122  restriction endonuclease S subunits-like  25.4 
 
 
428 aa  54.3  0.000004  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.878738  n/a   
 
 
-
 
NC_012669  Bcav_1496  restriction modification system DNA specificity domain protein  26.05 
 
 
427 aa  53.9  0.000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.136919  normal 
 
 
-
 
NC_010577  XfasM23_0232  restriction endonuclease S subunit-like protein  43.08 
 
 
192 aa  54.3  0.000004  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2792  restriction modification system DNA specificity domain protein  23.19 
 
 
423 aa  53.9  0.000005  Haliangium ochraceum DSM 14365  Bacteria  normal  0.313089  normal 
 
 
-
 
NC_007947  Mfla_1216  restriction modification system DNA specificity subunit  25 
 
 
427 aa  53.5  0.000007  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
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