| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2598 |
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| Symbol | hsdS |
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| ID | 4201421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2865161 |
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| End bp | 2866414 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638083465 |
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| Product | type I restriction-modification enzyme, S subunit |
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| Protein accession | YP_696988 |
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| Protein GI | 110800744 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0732] Restriction endonuclease S subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0133376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAAG AAGTAAGAGA AGGATATAAG ATGACTGAAT TAGGTGAGAT ACCCAATGAA
TGGGAGGTTT GTCGCATAGA TGACTTATGC AAAGTGAATT CTAAATCATT AAATTCTAAG
ACAGAACCAA ATCTAGTTGT TAATTATATA GATATAGAAA GTGTATCAAC TGGTAAAATA
AATAATATTA AACAAATGAT ATTTAGTCAA GCACCTAGTA GAGCGAGAAG AGTTGTGAAG
AAAAATGATG TTATAATGTC AACAGTAAGA CCATATTTAA AAGCTTTTGT AAAGGTTAAG
AGTAGTTTGA ATAATTTAGT GTGTTCAACT GGATTTGCTG TGTTAGAAGT GAATGAAGGC
GTTAATTCGG AATTTGTATA TCAATCAATA TTAAGTAATT ATTTCATAGA ACAAATAAAA
AATAAAATGG TAGGTTCAAA TTATCCAGCG GTAAATTCAG ATGATGTTAA AGAAAGTAAG
TTGATATTAC CAAGTATACA AGAGCAAGAA AAAATTGCTG AAATACTTTC AACTGTAGAT
GAACAAATAG AAAATACAGA AAAATTAATA CAAAAAAATC AAGAACTTAA AAAAGGATTA
ATGCAACAAT TATTGACAAA AGGAATAGGA CATACAGAAT TTAAGAAAAC AGAATTAGGT
TATATACCAA AGGAATGGAA AATCATGAAG TTAGGAGAAG TATGTGATTT TAAACAAGGA
TTCCAAATTC CAAGAAGTGA GCAAATTAAT GAAGAAAAAG ATGGATATAT AAGGTATCTT
TATATAACTG ATTTCTTTTC AAATAATAAC AAGTTATTTA TAAAAGGTTC TGATAAATAT
TATTATATAA AATCAGATGA TATTACAATA GCTAACACAG GAAATACTTG TGGTAAAGCA
TTTAAAGGAG CTGAAGGGAT TTTAAGTAAT AATATGTTTA AGATATTTAA TAATAAAGAA
GTTTTGTTGA ATGATTTTCT ATGGCAATAT TTAAATAGTA ATTACTATTG GAAAGAGCTT
AATAAATATT TTAATACTGC TGGTCAACCA CATGTAGGGC ATAAAAATAT GGCAAATTTA
ATGATTGCTA TTCCTGAATC GTTAAATGAA CAAAGTGAAA TAGCTTTAAT ATTATCATCA
ATAGATAAAA GAATAGAAAA ATATGAAAAC AAAAAAGAAA AATTAAAAGA ATTAAAAAAA
GGATTAATGC AGCAATTATT AACAGGATAT ATAAGGCTTA TTTGGAATGA TTAA
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| Protein sequence | MKKEVREGYK MTELGEIPNE WEVCRIDDLC KVNSKSLNSK TEPNLVVNYI DIESVSTGKI
NNIKQMIFSQ APSRARRVVK KNDVIMSTVR PYLKAFVKVK SSLNNLVCST GFAVLEVNEG
VNSEFVYQSI LSNYFIEQIK NKMVGSNYPA VNSDDVKESK LILPSIQEQE KIAEILSTVD
EQIENTEKLI QKNQELKKGL MQQLLTKGIG HTEFKKTELG YIPKEWKIMK LGEVCDFKQG
FQIPRSEQIN EEKDGYIRYL YITDFFSNNN KLFIKGSDKY YYIKSDDITI ANTGNTCGKA
FKGAEGILSN NMFKIFNNKE VLLNDFLWQY LNSNYYWKEL NKYFNTAGQP HVGHKNMANL
MIAIPESLNE QSEIALILSS IDKRIEKYEN KKEKLKELKK GLMQQLLTGY IRLIWND
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