Gene Shew185_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1978 
Symbol 
ID5370933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2352528 
End bp2354378 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content43% 
IMG OID640830182 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001366184 
Protein GI153000503 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT TATCCATAAC AGACACTCAC GCTCACAATA CCGAAGCCAC GCCAACGGCT 
GAAAATTTAA TTACCACGCA CCTTGATATT TGGACGACTG CGATAGAACA AAAGTCTTCA
GCAGGCCGTG GCAGTTCAAA AAAGTTTTCG CTTTATGGCA TTAAAAAACT GCGTGAACTG
ATTTTAGAAC TCGCCGTGCG CGGTAAGTTA GTGCCGCAGG CCAGCCGCGA GGCGAGAAAT
AGTGCGAACT ATGAACCCGC GTCAGTCTTG CTAGAACGCA TTGCTGCTGA AAAAGCGCAG
TTAGTGAAGG AGGGGAAGCT TAAAAAACAG AAGCCGTTAC CAGAGATTAG TGATGATGAA
AAGCCGTTTG AATTGCCGAA TGGATGGGAA TGGTCGAGAC TTTCAGAAAC TGGTTTAGGC
TCTACGGGAA AAACACCCAG TACAAAACAA TCTAGCTTTT TTGATGGAAA TATTCCTTTT
ATTGGGCCTG GACAAATTAC GCCGGCAGGA ATTGTTTTAA AGGCAGAAAA ATTTTTAAGT
CAAAGTGGTC TTGGGAATAG TTGCGAAGCA TTACCAGGTG ATATTTTCAT GGTCTGCATT
GGTGGATCTA TTGGTAAAGC GGCGATTGTT GTTGAACGTT CTGGGTTTAA TCAGCAGATT
AACTGTATTT CGCCATTACA TATAGCAAGT AAATATTTGT ATTTTGCGTT ATCAACTAAT
AGTTTTCATT CTTCTGTCTT AGAAAAGGCG ACTGGATCTG CTACACCTAT TATTAACCGT
GGAAAATGGG AAGAGCTTCC TGTTCCAATA GCCCCACTCG AAGAACAACA CCGAATCGTC
GCTAAAGTCG ATGAGTTGAT GAGCTTGTGT GATGCCCTTG AAGCACAAAC TGAAGCCAGT
ATTTCGGCAC ACCAAATCTT AGTCGAAACC CTGCTCAATG CGCTGCTATT GCCACAAACG
GCTGCTAATA CTGCAAGTCA ATCTGATGTC AGCCTTGAAC GGCCTTTTAC AAATAGCTTT
GTTAAGGATT GGCAACGTGT TGCCGAACAC TTCGACACCT TGTTCACTAC GAGTGCCAGC
ATCGACACGC TAAAGCAAAC CATCCTCCAA CTTGCCGTGA TGGGTAAGCT AGTAAAACAA
GACCCTAATG ACGAACCAGC AGCCAAACTA CTCGCGCGTA TCGCCAAAGA AAAAGCCCAG
CTGATCAAAA ATAATAAAAT TAAAAAACAA TCGGAAGTAA ATCCTATTGG CGAAGTAGTC
GTTTTACCCG ATACATGGCA ACAAATTCTA GTGCAAGACT TTGCGGACAT ACGTTTAGGC
AGCACCCCCA GCAGAGCAGA ACCATCATAT TGGTCTGGTG ATATTCCTTG GGTAAGCTCT
GGCGAAGTAG CAGGAAGTAT TATTAAGGAT ACCGCCGAAA AAATAACTCA ACTTGGTTTT
GAAAAATCAA GCACTTCTAT TATACCAAAA CGAAGCTTGC TAATGGCTAT TATTGGGCAA
GGAAAAACAA GAGGGCAAAC CGCATTACTG GGAATTGATG CGTGCACAAA CCAAAATGTG
GCTGCCTTTA TCTTTAATGA AGAATTTGTT GTACCTGAGT TTGTTTGGAT TTGGGCTCAA
AGTAAGTATG AAGCTCACCG CGGTGACGGT AGAGGTGGAG CTCAACCAGC ATTAAACGGC
AAAATTGTTC GAAGCTTTAG ATTTCCTTTA CCACCACTAG AAGAACAACA TCGCATTGTC
GCTAAAATCG ATGAATTAAT GGCACTGTGT GAACAACTCA AAACCCGTTT AGCGGATTCG
CAAACCACCC AACTGCACCT CACCGACGCC ATCGTCGAAC AGGCGATCTA A
 
Protein sequence
MADLSITDTH AHNTEATPTA ENLITTHLDI WTTAIEQKSS AGRGSSKKFS LYGIKKLREL 
ILELAVRGKL VPQASREARN SANYEPASVL LERIAAEKAQ LVKEGKLKKQ KPLPEISDDE
KPFELPNGWE WSRLSETGLG STGKTPSTKQ SSFFDGNIPF IGPGQITPAG IVLKAEKFLS
QSGLGNSCEA LPGDIFMVCI GGSIGKAAIV VERSGFNQQI NCISPLHIAS KYLYFALSTN
SFHSSVLEKA TGSATPIINR GKWEELPVPI APLEEQHRIV AKVDELMSLC DALEAQTEAS
ISAHQILVET LLNALLLPQT AANTASQSDV SLERPFTNSF VKDWQRVAEH FDTLFTTSAS
IDTLKQTILQ LAVMGKLVKQ DPNDEPAAKL LARIAKEKAQ LIKNNKIKKQ SEVNPIGEVV
VLPDTWQQIL VQDFADIRLG STPSRAEPSY WSGDIPWVSS GEVAGSIIKD TAEKITQLGF
EKSSTSIIPK RSLLMAIIGQ GKTRGQTALL GIDACTNQNV AAFIFNEEFV VPEFVWIWAQ
SKYEAHRGDG RGGAQPALNG KIVRSFRFPL PPLEEQHRIV AKIDELMALC EQLKTRLADS
QTTQLHLTDA IVEQAI