197 homologs were found in PanDaTox collection
for query gene CCV52592_1061 on replicon NC_009715
Organism: Campylobacter curvus 525.92



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009715  CCV52592_1061  putative type I restriction-modification system, S subunit  100 
 
 
528 aa  1075    Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0371  type I restriction-modification system S subunit  67.39 
 
 
323 aa  384  1e-105  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE2744  type I restriction-modification system, S subunit  31.71 
 
 
532 aa  216  9e-55  Treponema denticola ATCC 35405  Bacteria  normal  0.0181132  n/a   
 
 
-
 
NC_012039  Cla_0347  type I restriction-modification system, S subunit  53.08 
 
 
390 aa  213  9e-54  Campylobacter lari RM2100  Bacteria  hitchhiker  0.00000269296  n/a   
 
 
-
 
NC_010506  Swoo_0501  restriction modification system DNA specificity subunit  40.31 
 
 
612 aa  189  1e-46  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.435558 
 
 
-
 
NC_009665  Shew185_1978  restriction modification system DNA specificity subunit  39.38 
 
 
616 aa  184  4.0000000000000006e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0835  restriction modification system DNA specificity domain  40.62 
 
 
563 aa  182  9.000000000000001e-45  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.835919  normal  0.945638 
 
 
-
 
NC_011761  AFE_0686  type I restriction-modification system, S subunit, putative  40.62 
 
 
561 aa  182  9.000000000000001e-45  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.840975  n/a   
 
 
-
 
NC_008639  Cpha266_1398  restriction modification system DNA specificity subunit  27.6 
 
 
557 aa  177  3e-43  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0845  restriction modification system DNA specificity domain protein  29.57 
 
 
495 aa  172  2e-41  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.31571e-19 
 
 
-
 
NC_009943  Dole_0822  restriction modification system DNA specificity subunit  26.9 
 
 
577 aa  165  2.0000000000000002e-39  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A4880  putative type I restriction-modification system S subunit  27.95 
 
 
571 aa  163  9e-39  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.960431 
 
 
-
 
NC_008609  Ppro_0355  restriction modification system DNA specificity subunit  25.68 
 
 
590 aa  163  9e-39  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20210  restriction modification system DNA specificity domain protein  28.84 
 
 
565 aa  162  1e-38  Halothermothrix orenii H 168  Bacteria  normal  0.266778  n/a   
 
 
-
 
NC_011884  Cyan7425_1201  restriction modification system DNA specificity domain protein  28.79 
 
 
572 aa  158  3e-37  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1897  restriction modification system DNA specificity subunit  28.42 
 
 
611 aa  155  2e-36  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00184495 
 
 
-
 
NC_008322  Shewmr7_2862  restriction modification system DNA specificity subunit  27.74 
 
 
589 aa  151  3e-35  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_3030  restriction modification system DNA specificity subunit  25.86 
 
 
564 aa  145  2e-33  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3227  restriction modification system DNA specificity subunit  26.22 
 
 
575 aa  143  6e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1132  restriction modification system DNA specificity subunit  40.46 
 
 
556 aa  140  7.999999999999999e-32  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.817215  n/a   
 
 
-
 
NC_002947  PP_4742  type I restriction-modification system, S subunit  26.48 
 
 
576 aa  139  1e-31  Pseudomonas putida KT2440  Bacteria  normal  0.266617  hitchhiker  0.00441093 
 
 
-
 
NC_007355  Mbar_A3272  type I restriction-modification system specificity subunit  33.86 
 
 
492 aa  139  1e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.425878  normal  0.243207 
 
 
-
 
NC_010524  Lcho_1311  restriction modification system DNA specificity subunit  25.7 
 
 
578 aa  139  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3267  restriction modification system DNA specificity subunit  25.69 
 
 
557 aa  138  2e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0920403  decreased coverage  0.00535253 
 
 
-
 
NC_011353  ECH74115_5859  putative type I restriction-modification system, S subunit  24.57 
 
 
584 aa  136  8e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4611  restriction modification system DNA specificity subunit  24.96 
 
 
561 aa  136  9.999999999999999e-31  Pseudomonas putida F1  Bacteria  normal  0.483614  hitchhiker  0.0000795371 
 
 
-
 
NC_010468  EcolC_3719  restriction modification system DNA specificity subunit  24.65 
 
 
585 aa  134  3e-30  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6044  type I restriction-modification system subunit S  23.61 
 
 
547 aa  132  1.0000000000000001e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  0.061065  n/a   
 
 
-
 
NC_007519  Dde_2496  subunit S of type I restriction-modification system  25.89 
 
 
565 aa  129  1.0000000000000001e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00268922  n/a   
 
 
-
 
NC_007954  Sden_1237  restriction modification system DNA specificity subunit  26.12 
 
 
633 aa  128  3e-28  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1015  restriction modification system DNA specificity subunit  23.51 
 
 
575 aa  128  3e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1576  type I restriction-modification system, S subunit  38.46 
 
 
399 aa  125  3e-27  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.200835  n/a   
 
 
-
 
NC_010717  PXO_02063  type I restriction-modification system, S subunit  30.83 
 
 
501 aa  117  3.9999999999999997e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1674  restriction modification system DNA specificity domain protein  24.04 
 
 
477 aa  115  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008599  CFF8240_1393  restriction and modification enzyme CjeI  41.51 
 
 
1285 aa  111  3e-23  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1253  Type I restriction enzyme EcoAI specificity protein  24.5 
 
 
597 aa  107  7e-22  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.00376854  normal 
 
 
-
 
NC_009438  Sputcn32_3525  restriction modification system DNA specificity subunit  25.06 
 
 
420 aa  106  1e-21  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3199  restriction modification system DNA specificity subunit  31.35 
 
 
400 aa  105  2e-21  Marinomonas sp. MWYL1  Bacteria  normal  0.365834  normal 
 
 
-
 
NC_003909  BCE_0842  type I restriction-modification enzyme, S subunit, putative  25.85 
 
 
476 aa  99.4  1e-19  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1991  restriction modification system DNA specificity domain  23.78 
 
 
490 aa  95.1  3e-18  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.120232  normal  0.112136 
 
 
-
 
NC_011206  Lferr_0967  restriction modification system DNA specificity domain  26.11 
 
 
426 aa  95.1  3e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.800586  normal  0.821104 
 
 
-
 
NC_011761  AFE_0829  type I restriction-modification system, S subunit  25.84 
 
 
409 aa  93.6  9e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.232689  n/a   
 
 
-
 
NC_008639  Cpha266_1710  restriction modification system DNA specificity subunit  33.14 
 
 
414 aa  90.9  5e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_3109  restriction modification system DNA specificity subunit  23.25 
 
 
426 aa  89  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009712  Mboo_1032  restriction modification system DNA specificity subunit  26.09 
 
 
457 aa  87  8e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41908  normal  0.322454 
 
 
-
 
NC_013203  Apar_0198  restriction modification system DNA specificity domain protein  34.36 
 
 
386 aa  86.7  0.000000000000001  Atopobium parvulum DSM 20469  Bacteria  normal  0.719886  decreased coverage  0.000218103 
 
 
-
 
NC_010814  Glov_1414  restriction modification system DNA specificity domain  24 
 
 
447 aa  84  0.000000000000007  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00014984  n/a   
 
 
-
 
NC_011071  Smal_1037  restriction modification system DNA specificity domain  28.74 
 
 
364 aa  83.2  0.00000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0890662  normal 
 
 
-
 
NC_009943  Dole_2093  restriction modification system DNA specificity subunit  23.88 
 
 
477 aa  82  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2673  restriction modification system DNA specificity subunit  33.77 
 
 
415 aa  80.9  0.00000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.574489 
 
 
-
 
NC_008577  Shewana3_3793  restriction modification system DNA specificity subunit  28.66 
 
 
425 aa  80.5  0.00000000000006  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B4821  type I restriction-modification system, endonuclease S subunit  32.54 
 
 
382 aa  80.5  0.00000000000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2960  restriction modification system DNA specificity subunit  23.35 
 
 
587 aa  78.2  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3537  putative type I restriction-modification system, S subunit  23.76 
 
 
419 aa  77.4  0.0000000000006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0268  restriction endonuclease S subunits  25.17 
 
 
444 aa  77  0.0000000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.277222  normal 
 
 
-
 
NC_008786  Veis_1566  restriction modification system DNA specificity subunit  29.59 
 
 
403 aa  76.6  0.0000000000009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0293394  unclonable  0.0000192379 
 
 
-
 
NC_008740  Maqu_0030  restriction modification system DNA specificity subunit  25.82 
 
 
435 aa  76.3  0.000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.534213  n/a   
 
 
-
 
NC_010814  Glov_3515  restriction modification system DNA specificity domain  23.67 
 
 
514 aa  75.9  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0086  restriction modification system DNA specificity protein  24.7 
 
 
538 aa  75.9  0.000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_4083  restriction modification system DNA specificity subunit  31.28 
 
 
409 aa  75.5  0.000000000002  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011882  Cyan7425_5291  hypothetical protein  29.38 
 
 
555 aa  74.7  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.673527  n/a   
 
 
-
 
NC_008787  CJJ81176_0777  type I restriction modification DNA specificity domain-containing protein  22 
 
 
422 aa  74.7  0.000000000004  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  decreased coverage  0.00318537  n/a   
 
 
-
 
NC_013161  Cyan8802_0727  restriction modification system DNA specificity domain protein  23.4 
 
 
400 aa  73.9  0.000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0968972 
 
 
-
 
NC_010814  Glov_0637  restriction modification system DNA specificity domain  23.16 
 
 
422 aa  73.9  0.000000000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0878  type I restriction modification system methylase  24.65 
 
 
424 aa  73.6  0.000000000008  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.707045 
 
 
-
 
NC_010085  Nmar_0607  restriction modification system DNA specificity subunit  24.15 
 
 
438 aa  73.2  0.00000000001  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010803  Clim_2467  restriction modification system DNA specificity domain  29.95 
 
 
438 aa  72.8  0.00000000001  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1071  restriction modification system DNA specificity subunit  27.64 
 
 
429 aa  72.8  0.00000000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008573  Shewana3_4163  restriction modification system DNA specificity subunit  29.33 
 
 
405 aa  72.4  0.00000000002  Shewanella sp. ANA-3  Bacteria  normal  0.864984  normal  0.0584456 
 
 
-
 
NC_013161  Cyan8802_3989  restriction modification system DNA specificity domain protein  30.81 
 
 
456 aa  72  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0737122 
 
 
-
 
NC_013730  Slin_3089  restriction modification system DNA specificity domain protein  22.45 
 
 
520 aa  72  0.00000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.497517  normal  0.376247 
 
 
-
 
NC_007925  RPC_3653  type I restriction enzyme StySPI specificity protein  23.49 
 
 
460 aa  71.2  0.00000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.234587  normal  0.701676 
 
 
-
 
NC_013502  Rmar_2893  restriction modification system DNA specificity domain protein  26.79 
 
 
237 aa  70.9  0.00000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3599  hypothetical protein  30.77 
 
 
482 aa  71.2  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5244  restriction modification system DNA specificity domain  30.53 
 
 
422 aa  70.5  0.00000000007  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4264  type I restriction-modification system, S subunit  24.46 
 
 
495 aa  68.9  0.0000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_2421  restriction modification system DNA specificity subunit  27.96 
 
 
402 aa  68.9  0.0000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.318068 
 
 
-
 
NC_007969  Pcryo_2364  restriction modification system DNA specificity subunit  37.63 
 
 
413 aa  68.2  0.0000000003  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.188022 
 
 
-
 
NC_011726  PCC8801_2214  restriction modification system DNA specificity domain protein  21.5 
 
 
457 aa  68.6  0.0000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_003912  CJE1195  type II restriction-modification enzyme  25 
 
 
1343 aa  68.2  0.0000000004  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2328  type I restriction-modification system specificity subunit  27.13 
 
 
404 aa  67.8  0.0000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1281  restriction modification system DNA specificity subunit  26.39 
 
 
398 aa  68.2  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011668  Sbal223_4454  restriction modification system DNA specificity domain protein  27.78 
 
 
406 aa  67.8  0.0000000005  Shewanella baltica OS223  Bacteria  normal  0.859615  normal 
 
 
-
 
NC_007484  Noc_1204  restriction modification system DNA specificity subunit  22.53 
 
 
547 aa  65.9  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.340549  n/a   
 
 
-
 
NC_007955  Mbur_0508  restriction modification system DNA specificity subunit  31.07 
 
 
511 aa  65.9  0.000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1672  restriction modification system DNA specificity domain protein  27.99 
 
 
493 aa  65.9  0.000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1481  restriction endonuclease S subunits-like protein  25.94 
 
 
443 aa  65.5  0.000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2086  restriction modification system DNA specificity domain protein  24.29 
 
 
417 aa  65.1  0.000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000683293 
 
 
-
 
NC_002967  TDE2740  type I restriction-modification system, S subunit, truncation  28.65 
 
 
162 aa  64.3  0.000000005  Treponema denticola ATCC 35405  Bacteria  normal  0.0987272  n/a   
 
 
-
 
NC_007908  Rfer_0030  restriction modification system DNA specificity subunit  23.89 
 
 
447 aa  63.9  0.000000007  Rhodoferax ferrireducens T118  Bacteria  normal  0.539395  n/a   
 
 
-
 
NC_013595  Sros_7555  Restriction endonuclease S subunits-like protein  22.54 
 
 
402 aa  63.5  0.000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_3649  restriction modification system DNA specificity domain protein  23.96 
 
 
464 aa  63.5  0.000000009  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1492  restriction modification system DNA specificity subunit  20.43 
 
 
479 aa  63.5  0.000000009  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1635  restriction modification system DNA specificity domain protein  26.13 
 
 
419 aa  63.5  0.000000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0235263  normal 
 
 
-
 
NC_011663  Sbal223_3471  restriction modification system DNA specificity domain protein  29.89 
 
 
419 aa  63.2  0.00000001  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_0102  restriction modification system DNA specificity domain protein  26.2 
 
 
442 aa  62.8  0.00000002  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1360  restriction modification system DNA specificity subunit  27.17 
 
 
453 aa  62  0.00000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.502069 
 
 
-
 
NC_009338  Mflv_2409  restriction modification system DNA specificity subunit  23.45 
 
 
442 aa  62  0.00000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.39474  normal 
 
 
-
 
NC_007484  Noc_2904  restriction modification system DNA specificity subunit  23.7 
 
 
425 aa  60.8  0.00000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0487  restriction modification system DNA specificity subunit  29.41 
 
 
438 aa  60.8  0.00000005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.700794  normal  0.0187002 
 
 
-
 
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