| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1281 |
|---|
| Symbol | |
|---|
| ID | 5733174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1491032 |
|---|
| End bp | 1492228 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641278421 |
|---|
| Product | restriction modification system DNA specificity subunit |
|---|
| Protein accession | YP_001544057 |
|---|
| Protein GI | 159897810 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TGATTACCGC GCTCGATCAG TTAGCTGAAA CGCCCCAAGC CATCAGTCGC
ATTCGCGAGC TTATCTTGCA ATTGGCTGTG CAAGGCCGCT TGGTCGAGCA AGATCCTAAC
GATGAGCCAG CGTATAACAT GTTTAAGCCG CTAATCAAAG AGCAACAAAT GTTGAATATA
GACGTTAGAT CATCTATAAA TAAAGAACAT ACAAAATTTC AGATTCCTCC TTCATGGATA
TGGGTATCAC TGGATGATAT TGTAGTCTAT GATGCAGGTT CAAAGCATGA TCCCAACAAT
CTTGATCCTG ATAGTTGGTT GTTAGAACTT GAGGATATTG AAAAAAATAC CTCTGTTATT
TTAGGACAAT TTCTAGTAAA AGAGCGAAAG CCTAAAAGTA ACAAAGCAAG CTTCCAGAAA
AATGATATTC TTTATGGAAA ATTGCGACCT TATTTGAATA AAGTTATTGT TGCTCATACT
TCAGGATTTT GTACTACTGA AATAGTGGTG TTACGTCCAA AATTGGAATT GAGTCCCTTC
TATATACAAA ATTTCCTCAA AAGCCCCTTT TTCGTTAGCT ACGTAAACCA ACATTCATAT
GGAACAAAGA TGCCTCGACT AGGAACACTA GATGGCAAAA AGGCATCTAT ACCCCTACCA
CCACTCGCTG AACAACAACG CATCGTCGCC AAAGTTGCGC AATTGATGGC GTTGTGCGAT
CAGCTTGAGC AGCAGCAAAC CAGCCGCGAG GCGCTGCGCC AGCAAGTCCA GCAAAGCGCA
ATCAAGCAGC TTTTGAGCGA GCTAGCCCGA CCAGCCGATG CGCAGCAGAT TGCCCAACCA
AGCCAACCTG AGCGCCAAAC CAGCCTCTTT ACTCGGCCCA CTCTGGCGAA TCAACCAATC
GAGCCGCTTG CTGACGACGG ATTGAGCATA AGCAGTGAGC AACAGTTGTT TTTTGAGCAG
TTTGACGATC TGCATACCAC GCCCAAAGCA ATCGGCCAAT TGCGCGAATT GATTTTGCAG
CTCGCCGTGC AAGGCCGCTT GGTGGCTCAA AACCCCAGCG ACGAGCCAGC GAGCATTTTA
TTGGAACGAA TTCAAGCCGA AAAACAACGC CTGATTGCAG CGGGCCAACT CAAGCCCGAA
AAAGCGCTTA CGCCCATCGC CGCCAGCGAG CTACCATTTG GCTTACCCAA GGGCTAG
|
|---|
| Protein sequence | MNELITALDQ LAETPQAISR IRELILQLAV QGRLVEQDPN DEPAYNMFKP LIKEQQMLNI
DVRSSINKEH TKFQIPPSWI WVSLDDIVVY DAGSKHDPNN LDPDSWLLEL EDIEKNTSVI
LGQFLVKERK PKSNKASFQK NDILYGKLRP YLNKVIVAHT SGFCTTEIVV LRPKLELSPF
YIQNFLKSPF FVSYVNQHSY GTKMPRLGTL DGKKASIPLP PLAEQQRIVA KVAQLMALCD
QLEQQQTSRE ALRQQVQQSA IKQLLSELAR PADAQQIAQP SQPERQTSLF TRPTLANQPI
EPLADDGLSI SSEQQLFFEQ FDDLHTTPKA IGQLRELILQ LAVQGRLVAQ NPSDEPASIL
LERIQAEKQR LIAAGQLKPE KALTPIAASE LPFGLPKG
|
|---|
| |